Literature DB >> 28323341

Groupwise envelope models for imaging genetic analysis.

Yeonhee Park1, Zhihua Su2, Hongtu Zhu1.   

Abstract

Motivated by searching for associations between genetic variants and brain imaging phenotypes, the aim of this article is to develop a groupwise envelope model for multivariate linear regression in order to establish the association between both multivariate responses and covariates. The groupwise envelope model allows for both distinct regression coefficients and distinct error structures for different groups. Statistically, the proposed envelope model can dramatically improve efficiency of tests and of estimation. Theoretical properties of the proposed model are established. Numerical experiments as well as the analysis of an imaging genetic data set obtained from the Alzheimer's Disease Neuroimaging Initiative (ADNI) study show the effectiveness of the model in efficient estimation. Data used in preparation of this article were obtained from the Alzheimer's Disease Neuroimaging Initiative (ADNI) database.
© 2017, The International Biometric Society.

Entities:  

Keywords:  Dimension reduction; Envelope model; Grassmann manifold; Reducing subspace

Mesh:

Year:  2017        PMID: 28323341      PMCID: PMC5608647          DOI: 10.1111/biom.12689

Source DB:  PubMed          Journal:  Biometrics        ISSN: 0006-341X            Impact factor:   2.571


  5 in total

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Journal:  Neuroimage       Date:  2010-07-17       Impact factor: 6.556

2.  Bayesian Generalized Low Rank Regression Models for Neuroimaging Phenotypes and Genetic Markers.

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Review 3.  Genetics of the connectome.

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4.  SPReM: Sparse Projection Regression Model For High-dimensional Linear Regression.

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Journal:  J Am Stat Assoc       Date:  2015-04-22       Impact factor: 5.033

5.  Genetic influences on schizophrenia and subcortical brain volumes: large-scale proof of concept.

Authors:  Barbara Franke; Jason L Stein; Stephan Ripke; Michael C O'Donovan; Paul M Thompson; Benjamin M Neale; Sarah E Medland; Patrick F Sullivan; Verneri Anttila; Derrek P Hibar; Kimm J E van Hulzen; Alejandro Arias-Vasquez; Jordan W Smoller; Thomas E Nichols; Michael C Neale; Andrew M McIntosh; Phil Lee; Francis J McMahon; Andreas Meyer-Lindenberg; Manuel Mattheisen; Ole A Andreassen; Oliver Gruber; Perminder S Sachdev; Roberto Roiz-Santiañez; Andrew J Saykin; Stefan Ehrlich; Karen A Mather; Jessica A Turner; Emanuel Schwarz; Anbupalam Thalamuthu; Yin Yao Shugart; Yvonne Yw Ho; Nicholas G Martin; Margaret J Wright
Journal:  Nat Neurosci       Date:  2016-02-01       Impact factor: 24.884

  5 in total
  3 in total

1.  L2RM: Low-rank Linear Regression Models for High-dimensional Matrix Responses.

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Journal:  J Am Stat Assoc       Date:  2019-04-30       Impact factor: 5.033

2.  Metabolic Links to Socioeconomic Stresses Uniquely Affecting Ancestry in Normal Breast Tissue at Risk for Breast Cancer.

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3.  Envelope-based partial partial least squares with application to cytokine-based biomarker analysis for COVID-19.

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  3 in total

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