| Literature DB >> 28298470 |
Jordi Merino1,2,3, Aaron Leong2,4, Daniel C Posner5, Bianca Porneala4, Lluís Masana3, Josée Dupuis5,6, Jose C Florez7,2,8.
Abstract
OBJECTIVE: This study tested the hypothesis that genetically raised hyperglycemia increases coronary artery disease (CAD) risk separately from the risk conferred by type 2 diabetes as a whole. RESEARCH DESIGN AND METHODS: We conducted a Mendelian randomization (MR) analysis using summary-level statistics from the largest published meta-analyses of genome-wide association studies (GWAS) for fasting glucose (FG) (n = 133,010 participants free of diabetes) and CAD (n = 63,746 case subjects and 130,681 control subjects) of predominantly European ancestry. FG-increasing variants associated with type 2 diabetes from the largest GWAS for type 2 diabetes were excluded. Variants with pleiotropic effects on other CAD risk factors (blood lipids, blood pressure, and obesity) were excluded using summary-level data from the largest published GWAS. Data from the Framingham Heart Study were used to validate the MR instrument and to build an FG genetic risk score (GRS).Entities:
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Year: 2017 PMID: 28298470 PMCID: PMC5399655 DOI: 10.2337/dc16-2625
Source DB: PubMed Journal: Diabetes Care ISSN: 0149-5992 Impact factor: 19.112
Characteristics of genetic variants considered for use in Mendelian randomization analysis of the effect of FG on CAD
| Chr | Position | SNP | Genes | EA | MAF | OR FG | OR CAD | OR T2D | |||
|---|---|---|---|---|---|---|---|---|---|---|---|
| ( | ( | ( | |||||||||
| 2 | 169 471 394 | rs560887 | C | 0.33 | 1.07 | 1.02 | 0.97 | 1.40 × 10−178 | 1.51 × 10−1 | 1.10 × 10−1 | |
| 3 | 172 195 984 | rs1280 | T | 0.14 | 1.03 | 1.00 | 1.04 | 8.56 × 10−18 | 6.36 × 10−1 | 6.60 × 10−2 | |
| 3 | 49 430 334 | rs11715915 | G | 0.27 | 1.01 | 1.05 | 1.00 | 4.90 × 10−8 | 6.29 × 10−06 | 5.30 × 10−1 | |
| 5 | 95 565 204 | rs4869272 | T | 0.32 | 1.02 | 0.99 | 1.01 | 1.02 × 10−15 | 5.81 × 10−1 | 1.81 × 10−1 | |
| 9 | 110 719 930 | rs16913693 | T | 0.02 | 1.04 | 1.03 | 0.96 | 3.51 × 10−11 | 3.50 × 10−1 | 5.30 × 10−1 | |
| 10 | 113 032 083 | rs10885122 | G | 0.11 | 1.03 | 1.02 | 1.02 | 6.32 × 10−17 | 2.14 × 10−1 | 5.30 × 10−2 | |
| 11 | 47 303 299 | rs11039182 | T | 0.31 | 1.02 | 1.00 | 1.01 | 4.82 × 10−22 | 8.94 × 10−1 | 4.42 × 10−1 | |
| 11 | 61 360 086 | rs174576 | T | 0.37 | 1.02 | 1.02 | 1.03 | 1.2 × 10−18 | 8.93 × 10−2 | 1.24 × 10−1 | |
| 12 | 131 551 691 | rs10747083 | A | 0.25 | 1.01 | 1.02 | 1.01 | 7.57 × 10−09 | 3.16 × 10−1 | 7.57 × 10−1 | |
| 13 | 27 385 599 | rs11619319 | A | 0.21 | 1.02 | 1.01 | 0.99 | 1.33 × 10−15 | 3.37 × 10−1 | 5.86 × 10−1 | |
| 14 | 99 909 014 | rs3783347 | G | 0.22 | 1.02 | 1.02 | 1.00 | 1.32 × 10−10 | 1.66 × 10−1 | 8.47 × 10−1 | |
| 20 | 22 505 099 | rs6113722 | G | 0.04 | 1.04 | 1.00 | 1.00 | 2.49 × 10−11 | 8.75 × 10−1 | 9.42 × 10−1 |
Chr, chromosome; EA, effect allele; MAF, minor allele frequency; SNP, single nucleotide polymorphism; T2D, type 2 diabetes.
Figure 1Estimate effect size of raised FG on CAD odds. Effect of FG-raising genetic variants (mmol/L) on CAD odds obtained from publicly available data from MAGIC and CARDIoGRAM Consortia. Each white dot represents a genome-wide FG-raising variant not associated with type 2 diabetes. The association of each variant with CAD (logarithmic OR transformation, ln[OR]) is denoted in the y-axis, and the association with FG is denoted by the x-axis. The red lines illustrate regression and 95% CI of FG on CAD. The effect of the polygenic instrument comprising all 12 FG-increasing variants increased the odds of CAD risk per 1 mmol/L increase in FG (OR 1.43 [95% CI 1.14–1.79]).
Figure 2MR estimate of raised FG on odds of CAD is shown in subgroup analyses after pleiotropic exclusion computed using five FG-raising variants. Shown for each FG-raising genetic variant are the estimates of raised FG on CAD odds obtained from publicly available data from MAGIC and CARDIoGRAM Consortia (blue diamond). Also, shown for each FG-increasing genetic variant is the estimate of the effect and the inverse variance weight (percentage proportional to the size of the gray square) and the 95% CI of the estimate. Each FG-raising genetic variant was tested for evidence of pleiotropic associations with other CAD risk factors using the cross-phenotype meta-analysis method at the most conservative threshold that excluded variants with nominal pleiotropic associations (P < 0.05). The MR instrument comprising five FG-raising variants increased odds of CAD risk by 33% per 1 mmol/L increase in FG (OR 1.33 [95% CI 1.02–1.73]). SNP, single nucleotide polymorphism.
Figure 3FG concentrations and type 2 diabetes (T2D) prevalence according to individual FG genetic risk score quintiles. Variation in FG concentrations and type 2 diabetes prevalence depending on the number of risk alleles identified at the FG loci, weighted by effect size in an aggregate genotype score for the FHS Offspring examination 8 and Third Generation examination 2 participants. FG GRS quintiles are represented on the x-axis. The left y-axis displays FG concentrations (mean ± 1.96 × SE) in individuals without diabetes according to the GRS quintiles (black dots). The right y-axis shows type 2 diabetes prevalence across GRS quintiles (n = 724 participants with type 2 diabetes). The FG difference (β-coefficient) between the top and bottom quintiles was 0.11 mmol/L (SE 0.02; P = 6.25 × 10−8). Type 2 diabetes prevalence was constant across FG GRS quintiles (Q1 = 13.1% vs. Q5 = 11.9%, P = 0.72). In all models, P values were obtained by the omnibus test for GRS quintiles.