Literature DB >> 28291751

The hyperthermophilic cystathionine γ-synthase from the aerobic crenarchaeon Sulfolobus tokodaii: expression, purification, crystallization and structural insights.

Dan Sato1, Tomoo Shiba1, Sae Mizuno1, Ayaka Kawamura1, Shoko Hanada1, Tetsuya Yamada2, Mai Shinozaki2, Masahiko Yanagitani2, Takashi Tamura2, Kenji Inagaki2, Shigeharu Harada1.   

Abstract

Cystathionine γ-synthase (CGS; EC 2.5.1.48), a pyridoxal 5'-phosphate (PLP)-dependent enzyme, catalyzes the formation of cystathionine from an L-homoserine derivative and L-cysteine in the first step of the transsulfuration pathway. Recombinant CGS from the thermoacidophilic archaeon Sulfolobus tokodaii (StCGS) was overexpressed in Escherichia coli and purified to homogeneity by heat treatment followed by hydroxyapatite and gel-filtration column chromatography. The purified enzyme shows higher enzymatic activity at 353 K under basic pH conditions compared with that at 293 K. Crystallization trials yielded three crystal forms from different temperature and pH conditions. Form I crystals (space group P21; unit-cell parameters a = 58.4, b = 149.3, c = 90.2 Å, β = 108.9°) were obtained at 293 K under acidic pH conditions using 2-methyl-2,4-pentanediol as a precipitant, whereas under basic pH conditions the enzyme crystallized in form II at 293 K (space group C2221; unit-cell parameters a = 117.7, b = 117.8, c = 251.3 Å) and in form II' at 313 K (space group C2221; unit-cell parameters a = 107.5, b = 127.7, c = 251.1 Å) using polyethylene glycol 3350 as a precipitant. X-ray diffraction data were collected to 2.2, 2.9 and 2.7 Å resolution for forms I, II and II', respectively. Structural analysis of these crystal forms shows that the orientation of the bound PLP in form II is significantly different from that in form II', suggesting that the change in orientation of PLP with temperature plays a role in the thermophilic enzymatic activity of StCGS.

Entities:  

Keywords:  Sulfolobus tokodaii; cystathionine γ-synthase; hyperthermophilic enzyme; methionine biosynthesis; pyridoxal 5′-phosphate; transsulfuration

Mesh:

Substances:

Year:  2017        PMID: 28291751      PMCID: PMC5349309          DOI: 10.1107/S2053230X17002011

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  28 in total

1.  Role of tyrosine 114 of L-methionine gamma-lyase from Pseudomonas putida.

Authors:  H Inoue; K Inagaki; N Adachi; T Tamura; N Esaki; K Soda; H Tanaka
Journal:  Biosci Biotechnol Biochem       Date:  2000-11       Impact factor: 2.043

2.  Cloning, purification and characterisation of cystathionine gamma-synthase from Nicotiana tabacum.

Authors:  T Clausen; M C Wahl; A Messerschmidt; R Huber; J C Fuhrmann; B Laber; W Streber; C Steegborn
Journal:  Biol Chem       Date:  1999-10       Impact factor: 3.915

3.  The crystal structure of cystathionine gamma-synthase from Nicotiana tabacum reveals its substrate and reaction specificity.

Authors:  C Steegborn; A Messerschmidt; B Laber; W Streber; R Huber; T Clausen
Journal:  J Mol Biol       Date:  1999-07-30       Impact factor: 5.469

4.  Complete genome sequence of an aerobic thermoacidophilic crenarchaeon, Sulfolobus tokodaii strain7.

Authors:  Y Kawarabayasi; Y Hino; H Horikawa; K Jin-no; M Takahashi; M Sekine; S Baba; A Ankai; H Kosugi; A Hosoyama; S Fukui; Y Nagai; K Nishijima; R Otsuka; H Nakazawa; M Takamiya; Y Kato; T Yoshizawa; T Tanaka; Y Kudoh; J Yamazaki; N Kushida; A Oguchi; K Aoki; S Masuda; M Yanagii; M Nishimura; A Yamagishi; T Oshima; H Kikuchi
Journal:  DNA Res       Date:  2001-08-31       Impact factor: 4.458

5.  Crystal structures of cystathionine gamma-synthase inhibitor complexes rationalize the increased affinity of a novel inhibitor.

Authors:  C Steegborn; B Laber; A Messerschmidt; R Huber; T Clausen
Journal:  J Mol Biol       Date:  2001-08-24       Impact factor: 5.469

Review 6.  The enzymology of cystathionine biosynthesis: strategies for the control of substrate and reaction specificity.

Authors:  Susan M Aitken; Jack F Kirsch
Journal:  Arch Biochem Biophys       Date:  2005-01-01       Impact factor: 4.013

7.  Purification and Properties of Cystathionine [gamma]-Synthase from Wheat (Triticum aestivum L.).

Authors:  B. D. Kreft; A. Townsend; H. D. Pohlenz; B. Laber
Journal:  Plant Physiol       Date:  1994-04       Impact factor: 8.340

8.  Enzymatic characterization and inhibitor discovery of a new cystathionine {gamma}-synthase from Helicobacter pylori.

Authors:  Yunhua Kong; Dalei Wu; Haiyun Bai; Cong Han; Jing Chen; Lili Chen; Lihong Hu; Hualiang Jiang; Xu Shen
Journal:  J Biochem       Date:  2007-11-01       Impact factor: 3.387

Review 9.  Sulfur amino acid metabolism: pathways for production and removal of homocysteine and cysteine.

Authors:  Martha H Stipanuk
Journal:  Annu Rev Nutr       Date:  2004       Impact factor: 11.848

10.  Kinetic characterization of methionine gamma-lyases from the enteric protozoan parasite Entamoeba histolytica against physiological substrates and trifluoromethionine, a promising lead compound against amoebiasis.

Authors:  Dan Sato; Wataru Yamagata; Shigeharu Harada; Tomoyoshi Nozaki
Journal:  FEBS J       Date:  2008-02       Impact factor: 5.542

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