Literature DB >> 28285835

Regulation of Mammalian Mitochondrial Gene Expression: Recent Advances.

Sarah F Pearce1, Pedro Rebelo-Guiomar2, Aaron R D'Souza1, Christopher A Powell1, Lindsey Van Haute1, Michal Minczuk3.   

Abstract

Perturbation of mitochondrial DNA (mtDNA) gene expression can lead to human pathologies. Therefore, a greater appreciation of the basic mechanisms of mitochondrial gene expression is desirable to understand the pathophysiology of associated disorders. Although the purpose of the mitochondrial gene expression machinery is to provide only 13 proteins of the oxidative phosphorylation (OxPhos) system, recent studies have revealed its remarkable and unexpected complexity. We review here the latest breakthroughs in our understanding of the post-transcriptional processes of mitochondrial gene expression, focusing on advances in analyzing the mitochondrial epitranscriptome, the role of mitochondrial RNA granules (MRGs), the benefits of recently obtained structures of the mitochondrial ribosome, and the coordination of mitochondrial and cytosolic translation to orchestrate the biogenesis of OxPhos complexes. Crown
Copyright © 2017. Published by Elsevier Ltd. All rights reserved.

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Year:  2017        PMID: 28285835      PMCID: PMC5538620          DOI: 10.1016/j.tibs.2017.02.003

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  106 in total

Review 1.  RNA nucleotide methylation.

Authors:  Yuri Motorin; Mark Helm
Journal:  Wiley Interdiscip Rev RNA       Date:  2011-03-23       Impact factor: 9.957

2.  Hierarchical RNA Processing Is Required for Mitochondrial Ribosome Assembly.

Authors:  Oliver Rackham; Jakob D Busch; Stanka Matic; Stefan J Siira; Irina Kuznetsova; Ilian Atanassov; Judith A Ermer; Anne-Marie J Shearwood; Tara R Richman; James B Stewart; Arnaud Mourier; Dusanka Milenkovic; Nils-Göran Larsson; Aleksandra Filipovska
Journal:  Cell Rep       Date:  2016-08-04       Impact factor: 9.423

3.  Modification of mitochondrial ribosomal RNA from hamster cells: the presence of GmG and late-methylated UmGmU in the large subunit (17S) RNA.

Authors:  D T Dubin; R H Taylor
Journal:  J Mol Biol       Date:  1978-06-05       Impact factor: 5.469

4.  Methylation of 12S rRNA is necessary for in vivo stability of the small subunit of the mammalian mitochondrial ribosome.

Authors:  Metodi D Metodiev; Nicole Lesko; Chan Bae Park; Yolanda Cámara; Yonghong Shi; Rolf Wibom; Kjell Hultenby; Claes M Gustafsson; Nils-Göran Larsson
Journal:  Cell Metab       Date:  2009-04       Impact factor: 27.287

5.  Mitochondrial ribosomal RNA (rRNA) methyltransferase family members are positioned to modify nascent rRNA in foci near the mitochondrial DNA nucleoid.

Authors:  Ken-Wing Lee; Cynthia Okot-Kotber; Joseph F LaComb; Daniel F Bogenhagen
Journal:  J Biol Chem       Date:  2013-09-13       Impact factor: 5.157

6.  Assignment of 2'-O-methyltransferases to modification sites on the mammalian mitochondrial large subunit 16 S ribosomal RNA (rRNA).

Authors:  Ken-Wing Lee; Daniel F Bogenhagen
Journal:  J Biol Chem       Date:  2014-07-29       Impact factor: 5.157

7.  Parallel Structural Evolution of Mitochondrial Ribosomes and OXPHOS Complexes.

Authors:  Eli O van der Sluis; Heike Bauerschmitt; Thomas Becker; Thorsten Mielke; Jens Frauenfeld; Otto Berninghausen; Walter Neupert; Johannes M Herrmann; Roland Beckmann
Journal:  Genome Biol Evol       Date:  2015-04-09       Impact factor: 3.416

8.  Human mitochondrial RNA turnover caught in flagranti: involvement of hSuv3p helicase in RNA surveillance.

Authors:  Roman J Szczesny; Lukasz S Borowski; Lien K Brzezniak; Aleksandra Dmochowska; Kamil Gewartowski; Ewa Bartnik; Piotr P Stepien
Journal:  Nucleic Acids Res       Date:  2009-10-28       Impact factor: 16.971

9.  The conserved interaction of C7orf30 with MRPL14 promotes biogenesis of the mitochondrial large ribosomal subunit and mitochondrial translation.

Authors:  Stephen Fung; Tamiko Nishimura; Florin Sasarman; Eric A Shoubridge
Journal:  Mol Biol Cell       Date:  2012-11-21       Impact factor: 4.138

10.  GRSF1 regulates RNA processing in mitochondrial RNA granules.

Authors:  Alexis A Jourdain; Mirko Koppen; Mateusz Wydro; Chris D Rodley; Robert N Lightowlers; Zofia M Chrzanowska-Lightowlers; Jean-Claude Martinou
Journal:  Cell Metab       Date:  2013-03-05       Impact factor: 31.373

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  52 in total

Review 1.  Beyond the unwinding: role of TOP1MT in mitochondrial translation.

Authors:  Simone A Baechler; Ilaria Dalla Rosa; Antonella Spinazzola; Yves Pommier
Journal:  Cell Cycle       Date:  2019-08-09       Impact factor: 4.534

2.  Suborganellar Localization of Mitochondrial Proteins and Transcripts in Human Cells.

Authors:  Smirnova Anna; Richert Ludovic; Smirnov Alexandre; Mély Yves; Tarassov Ivan
Journal:  Methods Mol Biol       Date:  2021

3.  Transcription initiation defines kinetoplast RNA boundaries.

Authors:  François M Sement; Takuma Suematsu; Liye Zhang; Tian Yu; Lan Huang; Inna Aphasizheva; Ruslan Aphasizhev
Journal:  Proc Natl Acad Sci U S A       Date:  2018-10-17       Impact factor: 11.205

4.  METTL21B Is a Novel Human Lysine Methyltransferase of Translation Elongation Factor 1A: Discovery by CRISPR/Cas9 Knockout.

Authors:  Joshua J Hamey; Beeke Wienert; Kate G R Quinlan; Marc R Wilkins
Journal:  Mol Cell Proteomics       Date:  2017-06-29       Impact factor: 5.911

Review 5.  Mitochondrial energy generation disorders: genes, mechanisms, and clues to pathology.

Authors:  Ann E Frazier; David R Thorburn; Alison G Compton
Journal:  J Biol Chem       Date:  2017-12-12       Impact factor: 5.157

Review 6.  Manipulating and elucidating mitochondrial gene expression with engineered proteins.

Authors:  Christopher P Wallis; Louis H Scott; Aleksandra Filipovska; Oliver Rackham
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2019-12-02       Impact factor: 6.237

7.  Dissecting the expression landscape of mitochondrial genes in lung squamous cell carcinoma and lung adenocarcinoma.

Authors:  Nan Li; Jing Zhao; Yibing Ma; Bhaskar Roy; Ren Liu; Karsten Kristiansen; Qiang Gao
Journal:  Oncol Lett       Date:  2018-07-10       Impact factor: 2.967

8.  Differential processing and localization of human Nocturnin controls metabolism of mRNA and nicotinamide adenine dinucleotide cofactors.

Authors:  Elizabeth T Abshire; Kelsey L Hughes; Rucheng Diao; Sarah Pearce; Shreekara Gopalakrishna; Raymond C Trievel; Joanna Rorbach; Peter L Freddolino; Aaron C Goldstrohm
Journal:  J Biol Chem       Date:  2020-08-23       Impact factor: 5.157

9.  The human mitochondrial 12S rRNA m4C methyltransferase METTL15 is required for mitochondrial function.

Authors:  Hao Chen; Zhennan Shi; Jiaojiao Guo; Kao-Jung Chang; Qianqian Chen; Cong-Hui Yao; Marcia C Haigis; Yang Shi
Journal:  J Biol Chem       Date:  2020-05-05       Impact factor: 5.157

Review 10.  Applying genomic and transcriptomic advances to mitochondrial medicine.

Authors:  William L Macken; Jana Vandrovcova; Michael G Hanna; Robert D S Pitceathly
Journal:  Nat Rev Neurol       Date:  2021-02-23       Impact factor: 42.937

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