Literature DB >> 28281877

Comprehensive Analysis of Interaction Networks of Telomerase Reverse Transcriptase with Multiple Bioinformatic Approaches: Deep Mining the Potential Functions of Telomere and Telomerase.

Chunyu Hou1,2, Fei Wang3, Xuewen Liu1, Guangming Chang4, Feng Wang5, Xin Geng1,6,7.   

Abstract

Telomerase reverse transcriptase (TERT) is the protein component of telomerase complex. Evidence has accumulated showing that the nontelomeric functions of TERT are independent of telomere elongation. However, the mechanisms governing the interaction between TERT and its target genes are not clearly revealed. The biological functions of TERT are not fully elucidated and have thus far been underestimated. To further explore these functions, we investigated TERT interaction networks using multiple bioinformatic databases, including BioGRID, STRING, DAVID, GeneCards, GeneMANIA, PANTHER, miRWalk, mirTarBase, miRNet, miRDB, and TargetScan. In addition, network diagrams were built using Cytoscape software. As competing endogenous RNAs (ceRNAs) are endogenous transcripts that compete for the binding of microRNAs (miRNAs) by using shared miRNA recognition elements, they are involved in creating widespread regulatory networks. Therefore, the ceRNA regulatory networks of TERT were also investigated in this study. Interestingly, we found that the three genes PABPC1, SLC7A11, and TP53 were present in both TERT interaction networks and ceRNAs target genes. It was predicted that TERT might play nontelomeric roles in the generation or development of some rare diseases, such as Rift Valley fever and dyscalculia. Thus, our data will help to decipher the interaction networks of TERT and reveal the unknown functions of telomerase in cancer and aging-related diseases.

Entities:  

Keywords:  aging; bioinformatics; cancer; telomerase; telomere

Mesh:

Substances:

Year:  2017        PMID: 28281877     DOI: 10.1089/rej.2016.1909

Source DB:  PubMed          Journal:  Rejuvenation Res        ISSN: 1549-1684            Impact factor:   4.663


  2 in total

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Authors:  Peng Zhang; Jiafeng Wang; Xiao Zhang; Xiaolan Wang; Liying Jiang; Xuefeng Gu
Journal:  Front Genet       Date:  2020-01-24       Impact factor: 4.599

2.  Circulating Monocytes Act as a Common Trigger for the Calcification Paradox of Osteoporosis and Carotid Atherosclerosis via TGFB1-SP1 and TNFSF10-NFKB1 Axis.

Authors:  Ziliang Zeng; Rui Guo; Zheyu Wang; Haolin Yan; Xin Lv; Qiancheng Zhao; Xu Jiang; Chi Zhang; Di Zhang; Canchun Yang; Wenpeng Li; Zhilei Zhang; Qiwei Wang; Renyuan Huang; Bo Li; Xumin Hu; Liangbin Gao
Journal:  Front Endocrinol (Lausanne)       Date:  2022-07-22       Impact factor: 6.055

  2 in total

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