| Literature DB >> 28279148 |
Rui Henriques1, Francisco L Ferreira2, Sara C Madeira3.
Abstract
Entities:
Year: 2017 PMID: 28279148 PMCID: PMC5345246 DOI: 10.1186/s12859-017-1573-4
Source DB: PubMed Journal: BMC Bioinformatics ISSN: 1471-2105 Impact factor: 3.169
Biological networks used to experimentally assess BicPAMS
| Type | Source | Organism |
|
| Density | Notes on the weight of interactions |
|---|---|---|---|---|---|---|
| GI (gene interactions) | DryGIN | Yeast | 4455 | 191309 | 1.0% | Weights (65% negative) from double-mutant arrays [36]. |
| GI (gene interactions) | STRING | Yeast | 6314 | 3759902 | 1.1% | Known and predicted associations benchmarked from multiple data sources and literature (text mining), and combined through an integrative score [37]. |
| PPI (protein interactions) | STRING | E. Coli | 8428 | 3293416 | 4.6% | |
| PPI (protein interactions) | STRING | Human | 19247 | 8548002 | 2.3% |