Literature DB >> 28277948

Karyotypic Evolution and Chromosomal Organization of Repetitive DNA Sequences in Species of Panaque, Panaqolus, and Scobinancistrus (Siluriformes and Loricariidae) from the Amazon Basin.

Thayana Ayres-Alves1, Adauto Lima Cardoso2, Cleusa Yoshiko Nagamachi1, Leandro Melo de Sousa3, Julio Cesar Pieczarka1, Renata Coelho Rodrigues Noronha1.   

Abstract

Loricariidae family comprises the greatest variability of Neotropical catfish species, with more than 800 valid species. This family shows significant chromosomal diversity. Mapping of repetitive DNA sequences can be very useful in exploring such diversity, especially among groups that appear to share a preserved karyotypic macrostructure. We describe the karyotypes of Panaque armbrusteri and Panaqolus sp., as assessed using classical cytogenetic methods. Moreover, we offer a map of their repetitive sequences, including 18S and 5S ribosomal DNAs, the Rex1 and Rex3 retrotransposons, and the Tc1-mariner transposon in P. armbrusteri, Panaqolus sp., Scobinancistrus aureatus, and Scobinancistrus pariolispos. Those species share chromosome numbers of 2n = 52, but are divergent in their chromosome structures and the distributions of their repetitive DNA sequences. In situ hybridization with 18S and 5S rDNA probes confirms chromosome location in different pairs; in Panaqolus sp. these sites are in synteny. This multigene family organization can be explained by the occurrence of chromosome rearrangements, and possible events, such as transposition and unequal crossing-over. Rex1 and Rex3 retrotransposons and the Tc1-mariner transposon appeared predominantly dispersed and in small clusters in some chromosome regions. These data emphasize the importance of repetitive sequences in promoting the karyotypic evolution of these species.

Entities:  

Keywords:  Ancistrini; chromosomal diversity; fish mapping; repetitive sequences; retrotransposons; transposons

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Substances:

Year:  2017        PMID: 28277948     DOI: 10.1089/zeb.2016.1373

Source DB:  PubMed          Journal:  Zebrafish        ISSN: 1545-8547            Impact factor:   1.985


  5 in total

1.  Ancestral Reconstruction of Karyotypes Reveals an Exceptional Rate of Nonrandom Chromosomal Evolution in Sunflower.

Authors:  Kate L Ostevik; Kieran Samuk; Loren H Rieseberg
Journal:  Genetics       Date:  2020-02-07       Impact factor: 4.562

Review 2.  Chromosome Evolution in Connection with Repetitive Sequences and Epigenetics in Plants.

Authors:  Shu-Fen Li; Ting Su; Guang-Qian Cheng; Bing-Xiao Wang; Xu Li; Chuan-Liang Deng; Wu-Jun Gao
Journal:  Genes (Basel)       Date:  2017-10-24       Impact factor: 4.096

3.  Karyotypic variation in the long-whiskered catfish Pimelodusblochii Valenciennes, 1840 (Siluriformes, Pimelodidae) from the lower Tapajós, Amazonas and Trombetas Rivers.

Authors:  Ivanny Coelho da Fonseca; Luan Aércio Melo Maciel; Frank Raynner Vasconcelos Ribeiro; Luís Reginaldo Ribeiro Rodrigues
Journal:  Comp Cytogenet       Date:  2018-08-02       Impact factor: 1.800

4.  The Bunocephalus coracoideus Species Complex (Siluriformes, Aspredinidae). Signs of a Speciation Process through Chromosomal, Genetic and Ecological Diversity.

Authors:  Milena Ferreira; Caroline Garcia; Daniele A Matoso; Isac S de Jesus; Marcelo de B Cioffi; Luiz A C Bertollo; Jansen Zuanon; Eliana Feldberg
Journal:  Front Genet       Date:  2017-09-21       Impact factor: 4.599

5.  Evolutionary insights in Amazonian turtles (Testudines, Podocnemididae): co-location of 5S rDNA and U2 snRNA and wide distribution of Tc1/Mariner.

Authors:  Manoella Gemaque Cavalcante; Cleusa Yoshiko Nagamachi; Julio Cesar Pieczarka; Renata Coelho Rodrigues Noronha
Journal:  Biol Open       Date:  2020-04-28       Impact factor: 2.422

  5 in total

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