Literature DB >> 28277331

NUDT15 genotype distributions in the Korean population.

Hyoung-Tae Kim1, Rihwa Choi, Hong-Hee Won, Yon Ho Choe, Ben Kang, Kiwuk Lee, Hong Hoe Koo, Keon Hee Yoo, Young-Ho Kim, Soo-Youn Lee.   

Abstract

Thiopurines have a narrow therapeutic range because of frequent toxicity (i.e. marrow suppression), which is only partly explained by TPMT genetic polymorphisms, especially within Asian populations. Recent studies have identified NUDT15 variation as another important factor affecting thiopurine metabolism. In this study, a total of four NUDT15 coding variants (p.Arg139Cys, p.Arg139His, p.Val18Ile, and p.Val18_Val19insGlyVal) were genotyped in 920 Korean individuals using direct sequencing of NUDT15 for the first time in a Korean population. The allele frequencies were 86.7% for NUDT15*1, and 4.4, 6.9, 0.4, 1.1, and 0.50% for *2, *3, *4, *5, and *6, respectively. The NUDT15 phenotypes based on diplotypes included normal activity (n=692), intermediate activity (n=209), and low activity (n=19), occurring in 75.2, 22.7, and 2.1% of the population, respectively. This study was the first to report NUDT15 variants other than NUDT15*3 in the Korean population and more individuals who were categorized as having intermediate or low NUDT15 activity in our study than in previously reported studies in the Korean population (24.8 vs. 19.4%, P<0.05). This study is useful for future clinical studies on thiopurine pharmacogenetics and dosage adjustment in the Korean population.

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Year:  2017        PMID: 28277331     DOI: 10.1097/FPC.0000000000000274

Source DB:  PubMed          Journal:  Pharmacogenet Genomics        ISSN: 1744-6872            Impact factor:   2.089


  18 in total

1.  DNA-thioguanine nucleotide as a treatment marker in acute lymphoblastic leukemia patients with NUDT15 variant genotypes.

Authors:  Hee Young Ju; Ji Won Lee; Hee Won Cho; Ju Kyung Hyun; Youngeun Ma; Eun Sang Yi; Keon Hee Yoo; Ki Woong Sung; Rihwa Choi; Hong Hoe Koo; Soo-Youn Lee
Journal:  PLoS One       Date:  2021-01-22       Impact factor: 3.240

2.  Pathway genes and metabolites in thiopurine therapy in Korean children with acute lymphoblastic leukaemia.

Authors:  Rihwa Choi; Insuk Sohn; Min-Ji Kim; Hye In Woo; Ji Won Lee; Youngeun Ma; Eun Sang Yi; Hong Hoe Koo; Soo-Youn Lee
Journal:  Br J Clin Pharmacol       Date:  2019-05-27       Impact factor: 4.335

Review 3.  [Significance of NUDT15 gene in individualized treatment with 6-mercaptopurine in children with acute lymphoblastic leukemia].

Authors:  Jing He; Ling Liu
Journal:  Zhongguo Dang Dai Er Ke Za Zhi       Date:  2019-01

4.  Measurements of 6-thioguanine nucleotide levels with TPMT and NUDT15 genotyping in patients with Crohn's disease.

Authors:  Ji Hyeon Lee; Tae Jun Kim; Eun Ran Kim; Sung Noh Hong; Dong Kyung Chang; Li-Hwa Choi; Hye In Woo; Soo-Youn Lee; Young-Ho Kim
Journal:  PLoS One       Date:  2017-12-05       Impact factor: 3.240

5.  High-resolution melt analysis enables simple genotyping of complicated polymorphisms of codon 18 rendering the NUDT15 diplotype.

Authors:  Yoichi Kakuta; Yasuhiro Izumiyama; Daisuke Okamoto; Takeru Nakano; Ryo Ichikawa; Takeo Naito; Rintaro Moroi; Masatake Kuroha; Yoshitake Kanazawa; Tomoya Kimura; Hisashi Shiga; Hisaaki Kudo; Naoko Minegishi; Yosuke Kawai; Katsushi Tokunaga; Masao Nagasaki; Yoshitaka Kinouchi; Yasuo Suzuki; Atsushi Masasmune
Journal:  J Gastroenterol       Date:  2019-10-22       Impact factor: 7.527

6.  The Asian Pacific Association for the Study of the Liver clinical practice guidance: the diagnosis and management of patients with autoimmune hepatitis.

Authors:  Guiqiang Wang; Atsushi Tanaka; Hong Zhao; Jidong Jia; Xiong Ma; Kenichi Harada; Fu-Sheng Wang; Lai Wei; Qixia Wang; Ying Sun; Yuan Hong; Huiying Rao; Cumali Efe; George Lau; Diana Payawal; Rino Gani; Keith Lindor; Wasim Jafri; Masao Omata; Shiv Kumar Sarin
Journal:  Hepatol Int       Date:  2021-05-04       Impact factor: 6.047

7.  NUDT15 Genetic Variants in Chinese Han, Uighur, Kirghiz, and Dai Nationalities.

Authors:  Fang Zhang; Gulbanur Amat; Yanjing Tang; Ru Chen; Xin Tian; Wenting Hu; Changcheng Chen; Shuhong Shen; Yangyang Xie
Journal:  Front Pediatr       Date:  2022-04-14       Impact factor: 3.569

8.  Comparison of Direct Sequencing, Real-Time PCR-High Resolution Melt (PCR-HRM) and PCR-Restriction Fragment Length Polymorphism (PCR-RFLP) Analysis for Genotyping of Common Thiopurine Intolerant Variant Alleles NUDT15 c.415C>T and TPMT c.719A>G (TPMT*3C).

Authors:  Wai-Ying Fong; Chi-Chun Ho; Wing-Tat Poon
Journal:  Diagnostics (Basel)       Date:  2017-05-12

9.  Novel Tetra-Primer ARMS-PCR Assays for Thiopurine Intolerance Susceptibility Mutations NUDT15 c.415C>T and TPMT c.719A>G (TPMT*3C) in East Asians.

Authors:  Chi-Chun Ho; Wai-Ying Fong; Yuen-Hon Lee; Wing-Tat Poon
Journal:  Genes (Basel)       Date:  2017-10-23       Impact factor: 4.096

Review 10.  Pharmacogenetics of thiopurines for inflammatory bowel disease in East Asia: prospects for clinical application of NUDT15 genotyping.

Authors:  Yoichi Kakuta; Yoshitaka Kinouchi; Tooru Shimosegawa
Journal:  J Gastroenterol       Date:  2017-11-30       Impact factor: 7.527

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