Literature DB >> 28276032

Identification of Disease-Causing Mutations by Functional Complementation of Patient-Derived Fibroblast Cell Lines.

Laura S Kremer1,2, Holger Prokisch3,4.   

Abstract

Diagnosis of mitochondrial disorders is still hampered by their phenotypic and genotypic heterogeneity. In many cases, exome sequencing, the state-of-the-art method for genetically diagnosing mitochondrial disease patients, does not allow direct identification of the disease-associated gene but rather results in a list of variants in candidate genes. Here, we present a method to validate the disease-causing variant based on functional complementation assays. First, cell lines expressing a wild-type cDNA of the candidate genes are generated by lentiviral infection of patient-derived fibroblasts. Next, oxidative phosphorylation is measured by the Seahorse XF analyzer to assess rescue efficiency.

Entities:  

Keywords:  Disease-associated gene; Exome sequencing; Functional complementation; Mitochondrial disorders; Oxygen consumption rate

Mesh:

Year:  2017        PMID: 28276032     DOI: 10.1007/978-1-4939-6824-4_24

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  14 in total

1.  NDUFB8 Mutations Cause Mitochondrial Complex I Deficiency in Individuals with Leigh-like Encephalomyopathy.

Authors:  Dorota Piekutowska-Abramczuk; Zahra Assouline; Lavinija Mataković; René G Feichtinger; Eliška Koňařiková; Elżbieta Jurkiewicz; Piotr Stawiński; Mirjana Gusic; Andreas Koller; Agnieszka Pollak; Piotr Gasperowicz; Joanna Trubicka; Elżbieta Ciara; Katarzyna Iwanicka-Pronicka; Dariusz Rokicki; Sylvain Hanein; Saskia B Wortmann; Wolfgang Sperl; Agnès Rötig; Holger Prokisch; Ewa Pronicka; Rafał Płoski; Giulia Barcia; Johannes A Mayr
Journal:  Am J Hum Genet       Date:  2018-02-08       Impact factor: 11.025

Review 2.  Clinical genetics of Charcot-Marie-Tooth disease.

Authors:  Yujiro Higuchi; Hiroshi Takashima
Journal:  J Hum Genet       Date:  2022-03-18       Impact factor: 3.755

3.  Mutations in PPCS, Encoding Phosphopantothenoylcysteine Synthetase, Cause Autosomal-Recessive Dilated Cardiomyopathy.

Authors:  Arcangela Iuso; Marit Wiersma; Hans-Joachim Schüller; Ben Pode-Shakked; Dina Marek-Yagel; Mathias Grigat; Thomas Schwarzmayr; Riccardo Berutti; Bader Alhaddad; Bart Kanon; Nicola A Grzeschik; Jürgen G Okun; Zeev Perles; Yishay Salem; Ortal Barel; Amir Vardi; Marina Rubinshtein; Tal Tirosh; Gal Dubnov-Raz; Ana C Messias; Caterina Terrile; Iris Barshack; Alex Volkov; Camilla Avivi; Eran Eyal; Elisa Mastantuono; Muhamad Kumbar; Shachar Abudi; Matthias Braunisch; Tim M Strom; Thomas Meitinger; Georg F Hoffmann; Holger Prokisch; Tobias B Haack; Bianca J J M Brundel; Dorothea Haas; Ody C M Sibon; Yair Anikster
Journal:  Am J Hum Genet       Date:  2018-05-10       Impact factor: 11.025

4.  Case Report: A Variant Non-ketotic Hyperglycinemia With GLRX5 Mutations: Manifestation of Deficiency of Activities of the Respiratory Chain Enzymes.

Authors:  Wei-Xing Feng; Xiu-Wei Zhuo; Zhi-Mei Liu; Jiu-Wei Li; Wei-Hua Zhang; Yun Wu; Tong-Li Han; Fang Fang
Journal:  Front Genet       Date:  2021-05-13       Impact factor: 4.599

5.  Identification of a Novel Variant in MT-CO3 Causing MELAS.

Authors:  Manting Xu; Robert Kopajtich; Matthias Elstner; Zhaoxia Wang; Zhimei Liu; Junling Wang; Holger Prokisch; Fang Fang
Journal:  Front Genet       Date:  2021-05-12       Impact factor: 4.599

Review 6.  The functional genomics laboratory: functional validation of genetic variants.

Authors:  Richard J Rodenburg
Journal:  J Inherit Metab Dis       Date:  2018-02-14       Impact factor: 4.982

7.  Novel ECHS1 mutations in Leigh syndrome identified by whole-exome sequencing in five Chinese families: case report.

Authors:  Dan Sun; Zhimei Liu; Yongchu Liu; Miaojuan Wu; Fang Fang; Xianbo Deng; Zhisheng Liu; Liang Song; Kei Murayama; Chunhua Zhang; Yuanyuan Zhu
Journal:  BMC Med Genet       Date:  2020-07-16       Impact factor: 2.103

Review 8.  Genetics of mitochondrial diseases: Identifying mutations to help diagnosis.

Authors:  Sarah L Stenton; Holger Prokisch
Journal:  EBioMedicine       Date:  2020-05-23       Impact factor: 11.205

9.  Clinical, biochemical and genetic spectrum of 70 patients with ACAD9 deficiency: is riboflavin supplementation effective?

Authors:  Birgit M Repp; Elisa Mastantuono; Charlotte L Alston; Manuel Schiff; Tobias B Haack; Agnes Rötig; Anna Ardissone; Anne Lombès; Claudia B Catarino; Daria Diodato; Gudrun Schottmann; Joanna Poulton; Alberto Burlina; An Jonckheere; Arnold Munnich; Boris Rolinski; Daniele Ghezzi; Dariusz Rokicki; Diana Wellesley; Diego Martinelli; Ding Wenhong; Eleonora Lamantea; Elsebet Ostergaard; Ewa Pronicka; Germaine Pierre; Hubert J M Smeets; Ilka Wittig; Ingrid Scurr; Irenaeus F M de Coo; Isabella Moroni; Joél Smet; Johannes A Mayr; Lifang Dai; Linda de Meirleir; Markus Schuelke; Massimo Zeviani; Raphael J Morscher; Robert McFarland; Sara Seneca; Thomas Klopstock; Thomas Meitinger; Thomas Wieland; Tim M Strom; Ulrike Herberg; Uwe Ahting; Wolfgang Sperl; Marie-Cecile Nassogne; Han Ling; Fang Fang; Peter Freisinger; Rudy Van Coster; Valentina Strecker; Robert W Taylor; Johannes Häberle; Jerry Vockley; Holger Prokisch; Saskia Wortmann
Journal:  Orphanet J Rare Dis       Date:  2018-07-19       Impact factor: 4.123

10.  Arabidopsis thaliana alternative dehydrogenases: a potential therapy for mitochondrial complex I deficiency? Perspectives and pitfalls.

Authors:  Alessia Catania; Arcangela Iuso; Juliette Bouchereau; Laura S Kremer; Marina Paviolo; Caterina Terrile; Paule Bénit; Allan G Rasmusson; Thomas Schwarzmayr; Valeria Tiranti; Pierre Rustin; Malgorzata Rak; Holger Prokisch; Manuel Schiff
Journal:  Orphanet J Rare Dis       Date:  2019-10-29       Impact factor: 4.123

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