Literature DB >> 28275889

Automatic anatomical labeling of arteries and veins using conditional random fields.

Takayuki Kitasaka1, Mitsuru Kagajo2, Yukitaka Nimura3, Yuichiro Hayashi3, Masahiro Oda2, Kazunari Misawa4, Kensaku Mori3.   

Abstract

PURPOSE: For safe and reliable laparoscopic surgery, it is important to determine individual differences of blood vessels such as the position, shape, and branching structures. Consequently, a computer-assisted laparoscopy that displays blood vessel structures with anatomical labels would be extremely beneficial. This paper details an automated anatomical labeling method for abdominal arteries and veins extracted from 3D CT volumes.
METHODS: The proposed method represents a blood vessel tree as a probabilistic graphical model by conditional random fields (CRFs). An adaptive gradient algorithm is adopted for structure learning. The anatomical labeling of blood vessel branches is performed by maximum a posteriori estimation.
RESULTS: We applied the proposed method to 50 cases of arterial and portal phase abdominal X-ray CT volumes. The experimental results showed that the F-measure of the proposed method for abdominal arteries and veins was 94.4 and 86.9%, respectively.
CONCLUSION: We developed an automated anatomical labeling method to annotate each blood vessel branches of abdominal arteries and veins using CRF. The proposed method outperformed a state-of-the-art method.

Keywords:  Abdomen; Anatomical labeling; Probabilistic graphical model; Structure learning

Mesh:

Year:  2017        PMID: 28275889     DOI: 10.1007/s11548-017-1549-x

Source DB:  PubMed          Journal:  Int J Comput Assist Radiol Surg        ISSN: 1861-6410            Impact factor:   2.924


  5 in total

1.  Automatic anatomical labeling of the complete cerebral vasculature in mouse models.

Authors:  Sahar Ghanavati; Jason P Lerch; John G Sled
Journal:  Neuroimage       Date:  2014-03-28       Impact factor: 6.556

2.  Automated anatomical labeling of abdominal arteries and hepatic portal system extracted from abdominal CT volumes.

Authors:  Tetsuro Matsuzaki; Masahiro Oda; Takayuki Kitasaka; Yuichiro Hayashi; Kazunari Misawa; Kensaku Mori
Journal:  Med Image Anal       Date:  2014-11-15       Impact factor: 8.545

3.  Anatomical labeling of the Circle of Willis using maximum a posteriori probability estimation.

Authors:  Hrvoje Bogunovic; José María Pozo; Rubén Cárdenes; Luis San Román; Alejandro F Frangi
Journal:  IEEE Trans Med Imaging       Date:  2013-04-23       Impact factor: 10.048

4.  Anatomical labeling of the circle of willis using maximum a posteriori graph matching.

Authors:  David Robben; Stefan Sunaert; Vincent Thijs; Guy Wilms; Frederik Maes; Paul Suetens
Journal:  Med Image Comput Comput Assist Interv       Date:  2013

5.  AUTOMATED ANATOMICAL LABELING OF THE CEREBRAL ARTERIES USING BELIEF PROPAGATION.

Authors:  Murat Bilgel; Snehashis Roy; Aaron Carass; Paul A Nyquist; Jerry L Prince
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2013-03-13
  5 in total
  1 in total

Review 1.  The current and possible future role of 3D modelling within oesophagogastric surgery: a scoping review.

Authors:  Henry Robb; Gemma Scrimgeour; Piers Boshier; Anna Przedlacka; Svetlana Balyasnikova; Gina Brown; Fernando Bello; Christos Kontovounisios
Journal:  Surg Endosc       Date:  2022-03-11       Impact factor: 3.453

  1 in total

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