Literature DB >> 28271365

NOESY-WaterControl: a new NOESY sequence for the observation of under-water protein resonances.

Allan M Torres1, Gang Zheng2, William S Price1.   

Abstract

Highly selective and efficient water signal suppression is indispensable in biomolecular 2D nuclear Overhauser effect spectroscopy (NOESY) experiments. However, the application of conventional water suppression schemes can cause a significant or complete loss of the biomolecular resonances at and around the water chemical shift (ω2). In this study, a new sequence, NOESY-WaterControl, was developed to address this issue. The new sequence was tested on lysozyme and bovine pancreatic trypsin inhibitor (BPTI), demonstrating its efficiency in both water suppression and, more excitingly, preserving water-proximate biomolecular resonances in ω2. The 2D NOESY maps obtained using the new sequence thus provide more information than the maps obtained with conventional water suppression, thereby lessening the number of experiments needed to complete resonance assignments of biomolecules. The 2D NOESY-WaterControl map of BPTI showed strong bound water and exchangeable proton signals in ω1 but these signals were absent in ω2, indicating the possibility of using the new sequence to discriminate bound water and exchangeable proton resonances from non-labile proton resonances with similar chemical shifts to water.

Entities:  

Keywords:  Biomolecule; Diffusion; NMR; NOESY; PGSE; Protein NMR; Solvent signal suppression; Stimulated echo

Mesh:

Substances:

Year:  2017        PMID: 28271365     DOI: 10.1007/s10858-017-0100-2

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  9 in total

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Authors:  K Wüthrich; G Otting; E Liepinsh
Journal:  Faraday Discuss       Date:  1992       Impact factor: 4.008

2.  Convection-compensating PGSE experiment incorporating excitation-sculpting water suppression (CONVEX).

Authors:  Konstantin I Momot; Philip W Kuchel
Journal:  J Magn Reson       Date:  2004-07       Impact factor: 2.229

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Authors:  G Otting; E Liepinsh; K Wüthrich
Journal:  Science       Date:  1991-11-15       Impact factor: 47.728

4.  Protein hydration studied with homonuclear 3D 1H NMR experiments.

Authors:  G Otting; E Liepinsh; B T Farmer; K Wüthrich
Journal:  J Biomol NMR       Date:  1991-07       Impact factor: 2.835

5.  WaterControl: self-diffusion based solvent signal suppression enhanced by selective inversion.

Authors:  Gang Zheng; Allan M Torres; William S Price
Journal:  Magn Reson Chem       Date:  2016-02-28       Impact factor: 2.447

6.  A two-dimensional nuclear Overhauser enhancement (2D NOE) experiment for the elucidation of complete proton-proton cross-relaxation networks in biological macromolecules.

Authors:  A Kumar; R R Ernst; K Wüthrich
Journal:  Biochem Biophys Res Commun       Date:  1980-07-16       Impact factor: 3.575

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Authors:  G Chakrabarti; S Kim; M L Gupta; J S Barton; R H Himes
Journal:  Biochemistry       Date:  1999-03-09       Impact factor: 3.162

8.  Gradient-tailored excitation for single-quantum NMR spectroscopy of aqueous solutions.

Authors:  M Piotto; V Saudek; V Sklenár
Journal:  J Biomol NMR       Date:  1992-11       Impact factor: 2.835

9.  PGSTE-WATERGATE: an STE-based PGSE NMR sequence with excellent solvent suppression.

Authors:  Gang Zheng; Timothy Stait-Gardner; P G Anil Kumar; Allan M Torres; William S Price
Journal:  J Magn Reson       Date:  2007-12-07       Impact factor: 2.229

  9 in total

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