Literature DB >> 28270974

Noise stochastic corrected maximum a posteriori estimator for birefringence imaging using polarization-sensitive optical coherence tomography.

Deepa Kasaragod1, Shuichi Makita1, Young-Joo Hong1, Yoshiaki Yasuno1.   

Abstract

This paper presents a noise-stochastic corrected maximum a posteriori estimator for birefringence imaging using Jones matrix optical coherence tomography. The estimator described in this paper is based on the relationship between probability distribution functions of the measured birefringence and the effective signal to noise ratio (ESNR) as well as the true birefringence and the true ESNR. The Monte Carlo method is used to numerically describe this relationship and adaptive 2D kernel density estimation provides the likelihood for a posteriori estimation of the true birefringence. Improved estimation is shown for the new estimator with stochastic model of ESNR in comparison to the old estimator, both based on the Jones matrix noise model. A comparison with the mean estimator is also done. Numerical simulation validates the superiority of the new estimator. The superior performance of the new estimator was also shown by in vivo measurement of optic nerve head.

Keywords:  (110.5405) Polarimetric imaging; (170.3890) Medical optics instrumentation; (170.4460) Ophthalmic optics and devices; (170.4470) Ophthalmology; (170.4500) Optical coherence tomography

Year:  2017        PMID: 28270974      PMCID: PMC5330548          DOI: 10.1364/BOE.8.000653

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  29 in total

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Authors:  Shuguang Guo; Jun Zhang; Lei Wang; J Stuart Nelson; Zhongping Chen
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2.  The three-dimensional organization of collagen fibrils in the human cornea and sclera.

Authors:  Y Komai; T Ushiki
Journal:  Invest Ophthalmol Vis Sci       Date:  1991-07       Impact factor: 4.799

3.  Practical decomposition for physically admissible differential Mueller matrices.

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Journal:  Opt Lett       Date:  2014-04-01       Impact factor: 3.776

4.  Phase retardation measurement of retinal nerve fiber layer by polarization-sensitive spectral-domain optical coherence tomography and scanning laser polarimetry.

Authors:  Masahiro Yamanari; Masahiro Miura; Shuichi Makita; Toyohiko Yatagai; Yoshiaki Yasuno
Journal:  J Biomed Opt       Date:  2008 Jan-Feb       Impact factor: 3.170

5.  The structure of the lamina cribrosa of the human eye: an immunocytochemical and electron microscopical study.

Authors:  A R Elkington; C B Inman; P V Steart; R O Weller
Journal:  Eye (Lond)       Date:  1990       Impact factor: 3.775

6.  Fiber-based polarization-sensitive OCT for birefringence imaging of the anterior eye segment.

Authors:  Masahiro Yamanari; Satoru Tsuda; Taiki Kokubun; Yukihiro Shiga; Kazuko Omodaka; Yu Yokoyama; Noriko Himori; Morin Ryu; Shiho Kunimatsu-Sanuki; Hidetoshi Takahashi; Kazuichi Maruyama; Hiroshi Kunikata; Toru Nakazawa
Journal:  Biomed Opt Express       Date:  2015-01-08       Impact factor: 3.732

7.  Measurement of collagen and smooth muscle cell content in atherosclerotic plaques using polarization-sensitive optical coherence tomography.

Authors:  Seemantini K Nadkarni; Mark C Pierce; B Hyle Park; Johannes F de Boer; Peter Whittaker; Brett E Bouma; Jason E Bressner; Elkan Halpern; Stuart L Houser; Guillermo J Tearney
Journal:  J Am Coll Cardiol       Date:  2007-03-21       Impact factor: 24.094

8.  In vivo evaluation of human skin anisotropy by polarization-sensitive optical coherence tomography.

Authors:  Shingo Sakai; Masahiro Yamanari; Yiheng Lim; Noriaki Nakagawa; Yoshiaki Yasuno
Journal:  Biomed Opt Express       Date:  2011-08-16       Impact factor: 3.732

Review 9.  Polarization sensitive optical coherence tomography in the human eye.

Authors:  Michael Pircher; Christoph K Hitzenberger; Ursula Schmidt-Erfurth
Journal:  Prog Retin Eye Res       Date:  2011-06-26       Impact factor: 21.198

10.  Swept source/Fourier domain polarization sensitive optical coherence tomography with a passive polarization delay unit.

Authors:  Bernhard Baumann; WooJhon Choi; Benjamin Potsaid; David Huang; Jay S Duker; James G Fujimoto
Journal:  Opt Express       Date:  2012-04-23       Impact factor: 3.894

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  15 in total

1.  Noise-bias and polarization-artifact corrected optical coherence tomography by maximum a-posteriori intensity estimation.

Authors:  Aaron C Chan; Young-Joo Hong; Shuichi Makita; Masahiro Miura; Yoshiaki Yasuno
Journal:  Biomed Opt Express       Date:  2017-03-03       Impact factor: 3.732

2.  Three-dimensional multi-contrast imaging of in vivo human skin by Jones matrix optical coherence tomography.

Authors:  En Li; Shuichi Makita; Young-Joo Hong; Deepa Kasaragod; Yoshiaki Yasuno
Journal:  Biomed Opt Express       Date:  2017-02-01       Impact factor: 3.732

3.  Pixel-wise segmentation of severely pathologic retinal pigment epithelium and choroidal stroma using multi-contrast Jones matrix optical coherence tomography.

Authors:  Shinnosuke Azuma; Shuichi Makita; Arata Miyazawa; Yasushi Ikuno; Masahiro Miura; Yoshiaki Yasuno
Journal:  Biomed Opt Express       Date:  2018-06-06       Impact factor: 3.732

4.  Machine-learning based segmentation of the optic nerve head using multi-contrast Jones matrix optical coherence tomography with semi-automatic training dataset generation.

Authors:  Deepa Kasaragod; Shuichi Makita; Young-Joo Hong; Yoshiaki Yasuno
Journal:  Biomed Opt Express       Date:  2018-06-21       Impact factor: 3.732

5.  Generation and optimization of superpixels as image processing kernels for Jones matrix optical coherence tomography.

Authors:  Arata Miyazawa; Young-Joo Hong; Shuichi Makita; Deepa Kasaragod; Yoshiaki Yasuno
Journal:  Biomed Opt Express       Date:  2017-09-08       Impact factor: 3.732

6.  Clinical multi-functional OCT for retinal imaging.

Authors:  Shinnosuke Azuma; Shuichi Makita; Deepa Kasaragod; Satoshi Sugiyama; Masahiro Miura; Yoshiaki Yasuno
Journal:  Biomed Opt Express       Date:  2019-10-14       Impact factor: 3.732

7.  Polarization-sensitive optical coherence elastography.

Authors:  Arata Miyazawa; Shuichi Makita; En Li; Kohei Yamazaki; Masaki Kobayashi; Shingo Sakai; Yoshiaki Yasuno
Journal:  Biomed Opt Express       Date:  2019-09-16       Impact factor: 3.732

8.  Deep convolutional neural network-based scatterer density and resolution estimators in optical coherence tomography.

Authors:  Thitiya Seesan; Ibrahim Abd El-Sadek; Pradipta Mukherjee; Lida Zhu; Kensuke Oikawa; Arata Miyazawa; Larina Tzu-Wei Shen; Satoshi Matsusaka; Prathan Buranasiri; Shuichi Makita; Yoshiaki Yasuno
Journal:  Biomed Opt Express       Date:  2021-12-07       Impact factor: 3.732

9.  Comparative study of OCTA algorithms with a high-sensitivity multi-contrast Jones matrix OCT system for human skin imaging.

Authors:  Guoqiang Chen; Wen'ai Wang; Yanqiu Li
Journal:  Biomed Opt Express       Date:  2022-08-11       Impact factor: 3.562

10.  Automated noise estimation in polarization-sensitive optical coherence tomography.

Authors:  P A Keahey; B E Bouma; M Villiger
Journal:  Opt Lett       Date:  2020-05-15       Impact factor: 3.776

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