Literature DB >> 28269921

Differentiating Sense through Semantic Interaction Data.

T Elizabeth Workman1, Charlene Weir2, Thomas C Rindflesch3.   

Abstract

Words which have different representations but are semantically related, such as dementia and delirium, can pose difficult issues in understanding text. We explore the use of interaction frequency data between semantic elements as a means to differentiate concept pairs, using semantic predications extracted from the biomedical literature. We applied datasets of features drawn from semantic predications for semantically related pairs to two Expectation Maximization clustering processes (without, and with concept labels), then used all data to train and evaluate several concept classifying algorithms. For the unlabeled datasets, 80% displayed expected cluster count and similar or matching proportions; all labeled data exhibited similar or matching proportions when restricting cluster count to unique labels. The highest performing classifier achieved 89% accuracy, with F1 scores for individual concept classification ranging from 0.69 to 1. We conclude with a discussion on how these findings may be applied to natural language processing of clinical text.

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Mesh:

Year:  2017        PMID: 28269921      PMCID: PMC5333208     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  21 in total

1.  The interaction of domain knowledge and linguistic structure in natural language processing: interpreting hypernymic propositions in biomedical text.

Authors:  Thomas C Rindflesch; Marcelo Fiszman
Journal:  J Biomed Inform       Date:  2003-12       Impact factor: 6.317

Review 2.  Delirium in the hospitalized elder and recommendations for practice.

Authors:  Ted S Rigney
Journal:  Geriatr Nurs       Date:  2006 May-Jun       Impact factor: 2.361

3.  Measures of semantic similarity and relatedness in the biomedical domain.

Authors:  Ted Pedersen; Serguei V S Pakhomov; Siddharth Patwardhan; Christopher G Chute
Journal:  J Biomed Inform       Date:  2006-06-10       Impact factor: 6.317

Review 4.  The accurate diagnosis of early-onset dementia.

Authors:  Mario F Mendez
Journal:  Int J Psychiatry Med       Date:  2006       Impact factor: 1.210

Review 5.  Delirium in older persons.

Authors:  Sharon K Inouye
Journal:  N Engl J Med       Date:  2006-03-16       Impact factor: 91.245

6.  Hybrid methods for improving information access in clinical documents: concept, assertion, and relation identification.

Authors:  Anne-Lyse Minard; Anne-Laure Ligozat; Asma Ben Abacha; Delphine Bernhard; Bruno Cartoni; Louise Deléger; Brigitte Grau; Sophie Rosset; Pierre Zweigenbaum; Cyril Grouin
Journal:  J Am Med Inform Assoc       Date:  2011-05-19       Impact factor: 4.497

7.  Challenges and practical approaches with word sense disambiguation of acronyms and abbreviations in the clinical domain.

Authors:  Sungrim Moon; Bridget McInnes; Genevieve B Melton
Journal:  Healthc Inform Res       Date:  2015-01-31

8.  Harmony Search Algorithm for Word Sense Disambiguation.

Authors:  Saad Adnan Abed; Sabrina Tiun; Nazlia Omar
Journal:  PLoS One       Date:  2015-09-30       Impact factor: 3.240

9.  The role of sitters in delirium: an update.

Authors:  Frances M Carr
Journal:  Can Geriatr J       Date:  2013-03-04

10.  Documentation of delirium in the VA electronic health record.

Authors:  Carol Hope; Nicollete Estrada; Charlene Weir; Chia-Chen Teng; Kavitha Damal; Brian C Sauer
Journal:  BMC Res Notes       Date:  2014-04-03
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