Literature DB >> 28269877

Data-Driven Prediction of Beneficial Drug Combinations in Spontaneous Reporting Systems.

Ying Li1, Ping Zhang1, Zhaonan Sun1, Jianying Hu1.   

Abstract

Post-market withdrawal of medications because of adverse drug reactions (ADRs) could result in loss of effective compounds which are effective for treating a specific disease but have unfavorable benefit-to- harm ratio. Recent therapeutic successes have renewed interest in drug combinations, which could work synergistically to improve therapeutic efficacy or work antagonistically to alleviate the risk of the ADRs. However, experimental screening approaches are costly and often can identify only a small number of drug combinations. Spontaneous reporting systems (SRSs) routinely collect adverse drug events (ADEs) from patients on complex combinations of medications and provide an empirical and cost-effective source to detect unexpected beneficial drug combinations. In this paper, we proposed a novel data-driven method for the prediction of drug combinations where one drug could reduce the ADRs of the other, based on data from SRSs. The predictive model was shown to be effective using a commonly used evaluation approach in pharmacovigilance by constructing a known drug-drug interaction (DDI) reference standard. The method was applied to perform large-scale screening on SRS data for drug-ADR-drug triples where polypharmacy could potentially reduce the ADR. Analysis of the top ranking candidates showed high level of clinical validity.

Entities:  

Mesh:

Substances:

Year:  2017        PMID: 28269877      PMCID: PMC5333241     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  26 in total

1.  A statistical methodology for drug-drug interaction surveillance.

Authors:  G Niklas Norén; Rolf Sundberg; Andrew Bate; I Ralph Edwards
Journal:  Stat Med       Date:  2008-07-20       Impact factor: 2.373

Review 2.  Evaluating diagnostic tests with imperfect standards.

Authors:  P N Valenstein
Journal:  Am J Clin Pathol       Date:  1990-02       Impact factor: 2.493

3.  Large-scale exploration and analysis of drug combinations.

Authors:  Peng Li; Chao Huang; Yingxue Fu; Jinan Wang; Ziyin Wu; Jinlong Ru; Chunli Zheng; Zihu Guo; Xuetong Chen; Wei Zhou; Wenjuan Zhang; Yan Li; Jianxin Chen; Aiping Lu; Yonghua Wang
Journal:  Bioinformatics       Date:  2015-02-08       Impact factor: 6.937

4.  Data-driven prediction of drug effects and interactions.

Authors:  Nicholas P Tatonetti; Patrick P Ye; Roxana Daneshjou; Russ B Altman
Journal:  Sci Transl Med       Date:  2012-03-14       Impact factor: 17.956

5.  Safety of a short hydration method for cisplatin administration in comparison with a conventional method-a retrospective study.

Authors:  Emiko Sakaida; Shunichiro Iwasawa; Ryota Kurimoto; Takahiro Ebata; Chiaki Imai; Tomoko Oku; Ikuo Sekine; Yuji Tada; Koichiro Tatsumi; Yuichi Takiguchi
Journal:  Jpn J Clin Oncol       Date:  2016-01-10       Impact factor: 3.019

6.  Systems pharmacology of adverse event mitigation by drug combinations.

Authors:  Shan Zhao; Tomohiro Nishimura; Yibang Chen; Evren U Azeloglu; Omri Gottesman; Chiara Giannarelli; Mohammad U Zafar; Ludovic Benard; Juan J Badimon; Roger J Hajjar; Joseph Goldfarb; Ravi Iyengar
Journal:  Sci Transl Med       Date:  2013-10-09       Impact factor: 17.956

Review 7.  Defining a reference set to support methodological research in drug safety.

Authors:  Patrick B Ryan; Martijn J Schuemie; Emily Welebob; Jon Duke; Sarah Valentine; Abraham G Hartzema
Journal:  Drug Saf       Date:  2013-10       Impact factor: 5.606

8.  A reference standard for evaluation of methods for drug safety signal detection using electronic healthcare record databases.

Authors:  Preciosa M Coloma; Paul Avillach; Francesco Salvo; Martijn J Schuemie; Carmen Ferrajolo; Antoine Pariente; Annie Fourrier-Réglat; Mariam Molokhia; Vaishali Patadia; Johan van der Lei; Miriam Sturkenboom; Gianluca Trifirò
Journal:  Drug Saf       Date:  2013-01       Impact factor: 5.606

9.  A side effect resource to capture phenotypic effects of drugs.

Authors:  Michael Kuhn; Monica Campillos; Ivica Letunic; Lars Juhl Jensen; Peer Bork
Journal:  Mol Syst Biol       Date:  2010-01-19       Impact factor: 11.429

10.  STITCH: interaction networks of chemicals and proteins.

Authors:  Michael Kuhn; Christian von Mering; Monica Campillos; Lars Juhl Jensen; Peer Bork
Journal:  Nucleic Acids Res       Date:  2007-12-15       Impact factor: 16.971

View more
  2 in total

1.  Mining Directional Drug Interaction Effects on Myopathy Using the FAERS Database.

Authors:  Danai Chasioti; Xiaohui Yao; Pengyue Zhang; Samuel Lerner; Sara K Quinney; Xia Ning; Lang Li; Li Shen
Journal:  IEEE J Biomed Health Inform       Date:  2018-10-08       Impact factor: 5.772

2.  Assessment of the cardiovascular adverse effects of drug-drug interactions through a combined analysis of spontaneous reports and predicted drug-target interactions.

Authors:  Sergey Ivanov; Alexey Lagunin; Dmitry Filimonov; Vladimir Poroikov
Journal:  PLoS Comput Biol       Date:  2019-07-19       Impact factor: 4.475

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.