Literature DB >> 28256042

The AlloMap™ genomic biomarker story: 10 years after.

Mario C Deng1.   

Abstract

Over the last >20 years, we have co-developed the rationale for the first diagnostic and prognostic leukocyte gene expression profiling (GEP) biomarker test in transplantation medicine that gained US-FDA-regulatory clearance and international evidence-based medicine guideline acceptance to rule out moderate/severe acute cellular cardiac allograft rejection without invasive endomyocardial biopsies (EMB). Based on this test, a non-invasive clinical algorithm was implemented since 2005. After clinical implementation, this GEP-based monitoring in direct comparison with an EMB-based strategy was non-inferior with respect to detection of clinical rejection, defined as new onset allograft dysfunction with/without histology of ACR, re-transplantation or death, and at the same time improved patient satisfaction. Subsequently, we demonstrated the test's capacity when used as serial monitoring tool to predict these clinical rejection events. In this Personal Viewpoint article, I will discuss the various decision-making branching points that were made in the AlloMap biomarker test development to inform future genomic biomarker test development projects.
© 2017 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

Entities:  

Keywords:  allomap variability; cardiac allograft dysfunction; gene expression profiling; heart transplant rejection; non-invasive monitoring

Mesh:

Substances:

Year:  2017        PMID: 28256042     DOI: 10.1111/ctr.12900

Source DB:  PubMed          Journal:  Clin Transplant        ISSN: 0902-0063            Impact factor:   2.863


  11 in total

1.  Multi-dimensional COVID-19 short- and long-term outcome prediction algorithm.

Authors:  Mario C Deng
Journal:  Expert Rev Precis Med Drug Dev       Date:  2020-06-24

2.  Clinical Validation of an Immune Quiescence Gene Expression Signature in Kidney Transplantation.

Authors:  Enver Akalin; Matthew R Weir; Suphamai Bunnapradist; Daniel C Brennan; Rowena Delos Santos; Anthony Langone; Arjang Djamali; Hua Xu; Xia Jin; Sham Dholakia; Robert N Woodward; Jonathan S Bromberg
Journal:  Kidney360       Date:  2021-09-28

Review 3.  Pulmonary Infections in Immunocompromised Hosts: Clinical.

Authors:  Cristina Vazquez Guillamet; Joe Le Hsu; Gundeep Dhillon; Rodrigo Vazquez Guillamet
Journal:  J Thorac Imaging       Date:  2018-09       Impact factor: 3.000

4.  The evolution of patient-specific precision biomarkers to guide personalized heart-transplant care.

Authors:  Mario C Deng
Journal:  Expert Rev Precis Med Drug Dev       Date:  2020-10-28

5.  Association between preoperative peripheral blood mononuclear cell gene expression profiles, early postoperative organ function recovery potential and long-term survival in advanced heart failure patients undergoing mechanical circulatory support.

Authors:  Galyna Bondar; Ryan Togashi; Martin Cadeiras; Joanna Schaenman; Richard K Cheng; Lindsay Masukawa; Josephine Hai; Tra-Mi Bao; Desai Chu; Eleanor Chang; Maral Bakir; Sophie Kupiec-Weglinski; Victoria Groysberg; Tristan Grogan; Joseph Meltzer; Murray Kwon; Maura Rossetti; David Elashoff; Elaine Reed; Pei Pei Ping; Mario C Deng
Journal:  PLoS One       Date:  2017-12-13       Impact factor: 3.240

6.  Development of a multivariable gene-expression signature targeting T-cell-mediated rejection in peripheral blood of kidney transplant recipients validated in cross-sectional and longitudinal samples.

Authors:  Sofia Christakoudi; Manohursingh Runglall; Paula Mobillo; Tjir-Li Tsui; Claire Duff; Clara Domingo-Vila; Yogesh Kamra; Florence Delaney; Rosa Montero; Anastasia Spiridou; Theodoros Kassimatis; Sui Phin-Kon; Beatriz Tucker; Christopher Farmer; Terry B Strom; Graham M Lord; Irene Rebollo-Mesa; Daniel Stahl; Steven Sacks; Maria P Hernandez-Fuentes; Paramit Chowdhury
Journal:  EBioMedicine       Date:  2019-03-02       Impact factor: 8.143

7.  Differences in Gene Expression in Older Compared With Younger Kidney Transplant Recipients.

Authors:  Joanna M Schaenman; Maura Rossetti; Erik Lum; Basmah Abdalla; Suphamai Bunnapradist; Thu-Phuong Pham; Gabriel Danovitch; Elaine F Reed; Steve Cole
Journal:  Transplant Direct       Date:  2019-03-04

Review 8.  MicroRNAs: Key Regulators to Understand Osteoclast Differentiation?

Authors:  Claire Lozano; Isabelle Duroux-Richard; Hüseyin Firat; Eric Schordan; Florence Apparailly
Journal:  Front Immunol       Date:  2019-03-07       Impact factor: 7.561

9.  Causes of Renal Allograft Injury in Recipients With Normal Donor-derived Cell-free DNA.

Authors:  Wen Yan Xie; Kevin Kim; Naeem Goussous; Cinthia B Drachenberg; Joseph R Scalea; Matthew R Weir; Jonathan S Bromberg
Journal:  Transplant Direct       Date:  2021-03-05

10.  Longitudinal profiling of circulating miRNA during cardiac allograft rejection: a proof-of-concept study.

Authors:  Peter J Kennel; Alexandre Yahi; Yoshifumi Naka; Donna M Mancini; Charles C Marboe; Klaas Max; Kemal Akat; Thomas Tuschl; Elena-Rodica M Vasilescu; Emmanuel Zorn; Nicholas P Tatonetti; Paul Christian Schulze
Journal:  ESC Heart Fail       Date:  2021-03-13
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