| Literature DB >> 28246525 |
Abstract
The participation of sunlight in the natural chemistry of the earth is presented as a unique field of study, from historical observations to prospects for future inquiry. A compilation of known reactions shows the extent of light-driven interactions between naturally occurring components of land, air, and water, and provides the backdrop for an outline of the mechanisms of these phenomena. Catalyzed reactions, uncatalyzed reactions, direct processes, and indirect processes all operate in natural photochemical transformations, many of which are analogous to well-known biological reactions. By overlaying photochemistry and surface geochemistry, complementary approaches can be adopted to identify natural photochemical reactions and discern their significance in the environment.Entities:
Keywords: Atmosphere; Minerals; Natural photoreactions; Photocatalysis; Photochemistry; Soil; Surface geochemistry; Water
Year: 2017 PMID: 28246525 PMCID: PMC5307419 DOI: 10.1186/s12932-017-0039-y
Source DB: PubMed Journal: Geochem Trans ISSN: 1467-4866 Impact factor: 4.737
Fig. 1Photogeochemistry is the study of sunlight-induced chemical reactions among substances that are found naturally on Earth’s surface and intermingle across its domains. Examples of photochemical reactions are shown that occur in the basic domains of land, air, and water. Reaction details and references can be found in Table 1
Photochemical reactions of naturally occurring substances
| Reaction | Descriptor | Facilitators | References |
|---|---|---|---|
|
| |||
| Plant material → CO2 | (Oxidative) photochemical decomposition (mineralization) | [ | |
| Plant material (litter and living foliage) → CO | Photochemical decomposition (mineralization) | [ | |
| plant material (litter) → CH4 | (Reductive) photochemical decomposition (mineralization/methanification) | [ | |
| Plant material (foliage) → CH4 | (Reductive) photochemical mineralization | [ | |
| Plant material → ethane, ethene, propene, butane, other hydrocarbons | (Reductive) photochemical decomposition | [ | |
| Plant material → dissolved organic matter | Photochemical decomposition + dissolution | [ | |
| Plant material → biologically more labile compounds | Photochemical priming (encouraging subsequent biotic decomposition) | [ | |
| Solid organic matter → CO2 | (Oxidative) photochemical decomposition (mineralization) | Sand | [ |
| Soil organic matter → CH4 | (Reductive) photochemical decomposition (mineralization/methanification) | [ | |
| Sorbed or particulate organic matter → dissolved organic matter | Photochemical dissolution | [ | |
| Dissolved and colloidal organic matter → amino acids | Photochemical decomposition (depolymerization) | [ | |
| (Nonspecific) decomposition of dissolved organic matter | Photochemical decomposition | No facilitator | [ |
| Dissolved organic matter → CO | (Oxidative) photochemical decomposition (mineralization) | [ | |
| Dissolved organic matter → CO2 | (Oxidative) photochemical decomposition (mineralization) | No facilitator | [ |
| Dissolved organic matter → CH4 | (Reductive) photochemical decomposition (mineralization/methanification) | [ | |
| Dissolved organic matter → biologically more labile compounds | Photochemical priming (encouraging subsequent biotic decomposition) | [ | |
| Humic substances → humic substances with increased carboxylic acid content | photochemical oxidation + acidification | [ | |
| Dissolved organic matter → organic matter with increased aliphatic content | Photochemical aliphatization | [ | |
| Humic substances → small carboxylic acids; increased hydrophobicity of remaining organic matter | photochemical decomposition + acidification | [ | |
| Humic substances → simple carbonyl compounds (e.g., formaldehyde, acetone, pyruvate) | Photochemical decomposition | [ | |
| Dissolved organic matter → condensed aromatic structures (soluble and particulate) | Photochemical condensation | [ | |
| Carbohydrates and lipids → oxidized products | Photochemical oxidation | With and without ZnO | [ |
| (Nonspecific) decomposition of cellulose | Photochemical decomposition | No facilitator | [ |
| Cellulose → less polymerized cellulose with increased carbonyl and carboxyl content | Photochemical depolymerization + oxidation | [ | |
| (Nonspecific) decomposition of chitosan | Photochemical decomposition | [ | |
| (Nonspecific) decomposition of wool | Photochemical decomposition | [ | |
| (Nonspecific) decomposition of lignin | Photochemical decomposition | No facilitator | [ |
| Lignin → CH4, ethane | (Reductive) photochemical decomposition | [ | |
| Lignin → quinones | (Oxidative) photochemical decomposition | [ | |
| Lignin → aromatic and aliphatic aldehydes | (Oxidative) photochemical decomposition | [ | |
| Proteins → larger, aggregated proteins e.g., via intermolecular tyrosine dimerization | Photochemical crosslinking | [ | |
| Unconjugated unsaturated lipids → conjugated unsaturated lipids + insoluble material | Photochemical isomerization, condensation | Observed in seawater | [ |
| Polyunsaturated lipids → humic substances ( | (Oxidative) photochemical crosslinking | [ | |
| Fatty acids → | Photochemical oxidation, cleavage, | No facilitator | [ |
| Hydrocarbons e.g., ethane, ethene, propane, butane, paraffin → CO2 | Photochemical oxidation | TiO2 | [ |
| Long-chain alkanes → ketones, alcohols, acids | Photochemical oxidation | Naphthol, xanthone, anthraquinone | [ |
| Dienes + NOx → carboxylic acids | Photochemical oxidation | [ | |
| Aromatic compounds + NOx, NO2 −, or NO3 − → nitrated aromatic compounds | Photochemical nitration | No facilitator | [ |
| (Nonspecific) decomposition of polycyclic aromatic hydrocarbons | Photochemical decomposition | No facilitator | [ |
| Polycyclic aromatic hydrocarbons → quinones | Photochemical oxidation | Al2O3 | [ |
| Condensed aromatic compounds (dissolved black carbon) → nonspecific products, CO2 | (Oxidative) photochemical decomposition | [ | |
| Soot → oxygen-containing species | Photochemical oxidation | [ | |
| Crude oil → CO2 | Photochemical oxidation (mineralization) | Sand containing magnetite and ilmenite | [ |
| Amino acids → CO2 | Photochemical oxidation (mineralization) | Cu(II) (aq) | [ |
| Amino acids and peptides → smaller carboxylic acids, amines, and amides, NH3, CO2 | (Oxidative) photochemical decomposition, mineralization | [ | |
| Lysine → pipecolinic acid | Photochemical cyclization | HgS, ZnS, CdS | [ |
| Phenolic ketones and aldehydes → brown carbon | Photochemical oxidation, oligomerization | [ | |
| Phenol → hydroquinone, catechol → further oxidation products, CO2 | Photochemical oxidation | Fe2O3, TiO2 | [ |
| Decomposition of aqueous phenol, naphthol, methylphenols, methoxyphenols, anilines | Photochemical oxidation | Humic and fulvic acids, flavins | [ |
| Phenols → phenol dimers | Photochemical coupling/dimerization | Fe(III) (aq) | [ |
| Phenols → quinones, naphthols, aminonaphthols → naphthoquinones | Photochemical oxidation | No facilitator | [ |
| Quinones → quinone dimers | Photochemical coupling/dimerization | [ | |
| Quinones + benzocyclic olefins → addition products | Photochemical coupling | [ | |
| Ketones → carboxylic acids | Photochemical cleavage + acidification | [ | |
| Ketones → CH4, ethane | photochemical reduction | [ | |
| Aromatic ketones → condensed aromatic ring systems | Photochemical condensation | [ | |
| Vicinal diols → ketones, aldehydes, carboxylic acids | Photochemical cleavage + oxidation | Fe(III) porphyrins | [ |
| Cinnamic acid → cinnamic acid dimer | Photochemical coupling/dimerization | [ | |
| Acetic acid → CH4 + CO2 | Photochemical disproportionation/dismutation | TiO2; α-Fe2O3; Fe2O3 on montmorillonite (in the absence of O2); TiO2, Fe2O3, SrTiO3 plus an electron acceptor | [ |
| Acetic acid → CO2, CH4, ethane; methanol, ethanol, propionic acid, other products | Various | α-Fe2O3; TiO2, Fe2O3, SrTiO3, WO3 plus an electron acceptor | [ |
| Acetate, terpenes + O2 → organic (hydro)peroxides | Photochemical peroxidation | No facilitator | [ |
| Unsaturated lipids + O2 → lipid hydroperoxides | Photochemical peroxidation | Chlorophyll | [ |
| Propionic acid → ethane + CO2
| Photochemical decarboxylation | Fe2O3 alone or on montmorillonite | [ |
| Lactic acid → pyruvic acid + H2 | Photochemical oxidation + dehydrogenation | ZnS | [ |
| Lactic acid → acetaldehyde + CO2 | (Oxidative) photochemical decarboxylation | Aqueous Cu(II) and Fe(III) | [ |
| Glucose → CO2 | Photochemical oxidation | TiO2 | [ |
| Oxalic acid → CO2 | Photochemical oxidation | TiO2, sand, ash, | [ |
| Tartaric, citric, oxalic, malonic acids → oxidized products | Photochemical oxidation | Ferritin | [ |
| Pyruvic acid → pyruvic acid oligomers | Photochemical oligomerization | [ | |
| Salicylic acid → humic-like substances | Photochemical condensation | Accelerated in the presence of algae | [ |
| Syringic acid and other methoxybenzoic acids → methanol | Photochemical decomposition | [ | |
| Syringic acid and related compounds + Cl− → CH3Cl | Photochemical decomposition + chlorination | [ | |
| Methanol → ethylene glycol + H2
| Photochemical coupling + dehydrogenation | ZnS in the absence of air | [ |
| Isoprene → methylthreitol and methylerythritol (aerosols) | Photochemical oxidation | [ | |
| (Specific) plant compounds → compounds toxic to other organisms | Phototoxicity | [ | |
| CO2 → CO, HCOOH, HCHO, CH3OH, CH4 | Photochemical reduction (one-carbon products) | Fe(III) oxides, FeCO3, NiCO3, CoCO3, CuCO3, Mn(II) (aq), ZnO, TiO2, ZnS, CdS, ZrO2, WO3, CaFe2O4, BiVO4, hydrous Cu2O, transition metal ions and oxides in zeolites | [ |
| CO2 + H2 → CH4 | Photochemical reduction | α-Fe2O3 and Zn-Fe oxide in the presence of water, NiO | [ |
| CO2 + H2 → CO, HCOOH, CH3OH | Photochemical reduction | α-Fe2O3 and Zn-Fe oxide in the presence of water | [ |
| CO2 → HCOOH | Photochemical reduction | Porphyrins, phthalocyanines | [ |
| CO2 → ethanol | Photochemical reduction (products with more than one carbon) | SiC, ZnS, BiVO4, montmorillonite-modified TiO2 | [ |
| CH4 → HCOOH | Photochemical oxidation | TiO2 | [ |
| CH4 → ethane + H2 | Photochemical coupling + dehydrogenation | SiO2-Al2O3-TiO2 | [ |
|
| |||
| Plant foliage → NOx | [ | ||
| Plant foliage → N2O | [ | ||
| Particulate organic N → dissolved organic N and NH4 + | Photochemical decomposition (dissolution + mineralization) | [ | |
| Dissolved organic N → biologically more labile N | Photochemical priming | [ | |
| Amino acids and other organic N (including biologically recalcitrant organic N) → NH4 + | Photochemical decomposition (mineralization/ammonification) | No facilitator | [ |
| Humic substances → NO2 − | (Oxidative) photochemical decomposition (mineralization) | [ | |
| NH3 → NO2
−
| Photochemical oxidation (nitrification) | TiO2, ZnO, Al2O3, SiO2, MnO2, soil | [ |
| NH3 → N2O, N2 | Photochemical oxidation | TiO2 | [ |
| NH4
+ + NO2
− → N2
| Photochemical oxidation + reduction (denitrification) | TiO2, ZnO, Fe2O3, soil | [ |
| NH4NO3 → N2O | Photochemical oxidation + reduction (denitrification) | Al2O3 | [ |
| NOx → NO3 − | Photochemical oxidation | TiO2 | [ |
| NO2 → HONO, NO, N2O | Photochemical reduction | TiO2 | [ |
| NO2 − → NO3 − | Photochemical oxidation | TiO2, ZnO, Fe2O3, WO3 | [ |
| NO3 − → NH3 | Photochemical reduction | TiO2 plus electron acceptor | [ |
| NO3 − or HNO3 → N2O, NO, HONO, NO2 | Photochemical reduction (denitrification/renoxification) | Al2O3, TiO2, SiO2, | [ |
| NO3 − → NO2 − (+ O2) | Photochemical reduction (+oxidation) | No facilitator | [ |
| NO2 → HONO | Photochemical reduction | Humic acids, soot, soil | [ |
| N2O → N2 | Photochemical reduction | ZnO, Fe2O3, sand | [ |
| N2O → N2 + O2 | Photochemical dissociation | ZnO, Cu(I) zeolites | [ |
| N2 → NH3 | Photochemical reduction/(reductive) photochemical fixation | ZnO, Al2O3, Fe2O3, Ni2O3, CoO, CuO, Fe(III) in TiO2, Fe2O3-Fe3O4, MnO2, | [ |
| N2 + H2O → NH3 + O2 | Photochemical reduction + oxidation | TiO2 in the absence of O2, α-Fe2O3, | [ |
| N2 → N2H4 | Photochemical reduction | Sand | [ |
| N2 + H2O → N2H4 + O2 | Photochemical reduction + oxidation | TiO2 in the absence of O2 | [ |
| N2 + O2 → NO | Photochemical oxidation (oxidative) photochemical fixation | TiO2 in air | [ |
| N2 → NO2
−
| Photochemical oxidation (oxidative) photochemical fixation | Suspension of ZnO in the absence of O2
| [ |
| N2 + H2O → NO2 − + H2 | Photochemical oxidation + reduction | ZnO-Fe2O3 under N2 | [ |
|
| |||
| Organic complexes of Fe, Al, Co, Ni (aq) → ionic Fe, Al, Co, Ni (aq) | Photochemical decomposition + decomplexation | [ | |
| Organic complexes of Fe, Cu, Cr, Pb, V (aq) → colloidal Fe, Cu, Cr, Pb, V | Photochemical decomposition + precipitation | [ | |
| Organic matter (aq) + iron (aq) → organic matter + iron (s) | Photochemical flocculation | [ | |
| FeOH+ (aq) → FeOOH | Photochemical oxidation | [ | |
| Fe(III) (hydr)oxides (s) → | (Reductive) photochemical dissolution of FeOOH + photochemical oxidation of organic matter (if present) | No facilitator | [ |
| Fe(II) (aq)/Fe(OH)2 + H2O → Fe(III) + H2 | Photochemical oxidation + reduction | No facilitator | [ |
| Fe(III)-carboxylate complexes (aq) → Fe(II) (aq) | Photochemical reduction + decomplexation | [ | |
| Mn(IV) oxide → Mn(II) (aq) | (Reductive) photochemical dissolution | Dissolved organic matter | [ |
| Mn(II) (aq) → MnOx (x = 1 to 2) | Photochemical oxidation | Organic matter, TiO2 | [ |
| Cu(II) (aq) → Cu(I) | Photochemical reduction | Amino acids | [ |
| Cr(VI) (aq) → Cr(III) (aq) | Photochemical reduction | Ferritin, phenol | [ |
| ZnS + H2O → H2S → H2 | Photochemical reduction + dissolution | [ | |
| ZnS → Zn(0) + S(0) | Photochemical oxidation + reduction | [ | |
| CdS → Cd(II) + S(0) | Photochemical oxidation | [ | |
| HgS → Hg(II) (aq) + H2S | Photochemical dissolution | [ | |
| HgS → Hg(0) + S(0) | Photochemical oxidation + reduction | Cl− | [ |
| HgS → [Hg2Cl2 and other intermediates] → HgCl2 | Photochemical oxidation, reduction/photochemical dissolution | Cl− | [ |
| Hg(0) (aq) → Hg(II) (aq) | Photochemical oxidation | [ | |
| Hg(II) (aq) → Hg(0) (aq) | photochemical reduction | Fe(III) species, TiO2, organic matter | [ |
| Hg(II) (aq) → HgCH3 + | Photochemical methylation | [ | |
| HgCH3 + → Hg(II) | Photochemical demethylation | [ | |
| HgCH3Cl → Hg(II) + Hg(0) + CHCl3 + HCHO | Photochemical demethylation + reduction | [ | |
|
| |||
| Plant material → H2 | (Reductive) photochemical decomposition | [ | |
| Dissolved organic P → inorganic phosphate | Photochemical decomposition (mineralization) | [ | |
| Phosphate adsorbed to Fe(III) oxides or Fe(III)-organic matter complexes → free phosphate | Photochemical desorption | [ | |
| HS−/S2− → H2 | Photochemical reduction | CdS, α-Fe2O3 | [ |
| SO2 → SO4 2− | Photochemical oxidation | TiO2, Fe2O3, ZnO, CdS | [ |
| Thiols and SO3 2− → oxidized products | Photochemical oxidation | Ferritin | [ |
| Alkyl sulfides + NOx → aldehydes, sulfonic acids, SO2, SO4 2− | Photochemical oxidation | [ | |
| O2 → H2O2 | Photochemical reduction | ZnO, TiO2, sand in the presence of organic electron donors | [ |
| O2 → H2O | Photochemical reduction | α-Fe2O3
| [ |
| H2O → H2 | Photochemical reduction | Numerous catalysts, usually in the absence of O2, e.g., TiO2, ZnS, α-Fe2O3, hydrated Cu2O, tungstosilicate on TiO2, Ti(III)-zeolite, graphite oxide | [ |
| H2O → O2 | Photochemical oxidation | α-Fe2O3 + Fe(III) (aq), BiVO4 + electron acceptor, Mn2O3, λ-MnO2, Mn3O4, Co3O4 + sensitizer, AgCl, layered double hydroxide minerals | [ |
| H2O → H2 + O2 | Photochemical water splitting (oxidation + reduction) | TiO2, Fe2O3-Fe3O4, Fe2O3-FeS2, Cu2O, ZrO2, Ag zeolite, diverse two-mineral systems | [ |
| As(III) (aq) → As(V) (aq) | Photochemical oxidation | No facilitator | [ |
| As4S4 → As4S4 (polymorph) | Photochemical structural (crystal) modification | [ | |
| As2S3 → [As + S] + O2 → As2O3
| Photochemical oxidation/dissolution | Water | [ |
| Volatile organic compounds + NOx → O3 | Photochemical oxidation | [ | |
| Cl− → Cl− 2 (dichloride radical anion) | Photochemical oxidation | Chlorophyll, Hg(II) | [ |
| Cl− + O3 → Cl2 | Photochemical oxidation | [ | |
| NO3 − + Br− → Br2 | Photochemical oxidation | [ | |
A suggested descriptor is given for each reaction as well as substances reported to facilitate the reaction (if any) and some relevant notes. These facilitating substances also occur naturally, or (in just a few instances) are reasonably similar to something that might occur naturally. About 15% of the studies cited here can be considered field studies, which means that a reaction was observed with both natural sunlight and natural substances as well as under representative environmental conditions, as opposed to the use of artificial light and/or laboratory-prepared equivalents of natural compounds
Note on terminology The term “photochemical” can be used to maintain a clear distinction between abiotic photoreactions and analogous reactions involving light and living organisms (phototrophy). For example, “iron(II) photooxidation” can refer to either a biological process driven by light (photobiological/phototrophic iron(II) oxidation) or a strictly chemical, abiotic process (photochemical iron(II) oxidation). Similarly, an abiotic process that converts water to O2 under the action of light may be described as “photochemical oxidation of water” rather than simply “photooxidation of water” (even though the latter is shorter and often understood to mean a photochemical reaction); this distinguishes it from light-induced biological oxidation of water that might occur simultaneously in the same environment
Fig. 2Photogeochemical reactions, if enough information is known, can be classified using general principles of photochemistry. Examples are given for each of four categories in a simple scheme of classification based on the mechanism of reaction. Light-absorbing materials are shaded and catalysts are shown in italics. Intermediate processes in indirect reactions are indicated as separate reactions below the main reaction arrow. For additional explanation of these mechanisms, see the text and the references for specific reactions listed in Table 1
Fig. 3Simplified representations and some examples of processes that occur in photochemical reactions of natural substances: a promotion of electrons (e −) and generation of electron vacancies (holes, h +) upon irradiation of a semiconductor, which may then reduce and oxidize other substances; b excitement of organic compounds by sunlight which then directly react with other substances or are themselves altered, with examples of photochemical acidification, dissolution, and crosslinking; c photocatalysis via surface adsorption, which makes a species, here N2O, susceptible to the effect of light; d indirect generation, via a photosensitizer, of electrons and holes in a semiconductor: the difference between the highest occupied molecular orbital (HOMO) of the sensitizer and its lowest unoccupied molecular orbital (LUMO) is smaller than the band gap of the semiconductor, and therefore less energy is required to excite the sensitizer; e cooperative generation of transient reactive species by compounds that do not individually absorb sunlight; f generation of transient reactive species by light-absorbing compounds. Arrows with shadows indicate reactions induced by light (hν), asterisks (*) indicate excited species (electrons promoted to higher energy levels), single brackets (]) indicate mineral surfaces, and dotted lines (…) indicate surface adsorption. The references cited in the text offer additional, detailed explanations of these processes
Fig. 4The study of photogeochemistry reflects the overlap between surface geochemistry and photochemistry. The curved arrows represent three different but complementary approaches which can lead to the discovery of natural photoreactions: observing natural phenomena, extending known natural photoreactions, and contextualizing photoreactions that are not known to occur naturally