Literature DB >> 28244987

Capzimin is a potent and specific inhibitor of proteasome isopeptidase Rpn11.

Jing Li1, Tanya Yakushi2, Francesco Parlati1, Andrew L Mackinnon1, Christian Perez3, Yuyong Ma3, Kyle P Carter4, Sharon Colayco5, Gavin Magnuson5, Brock Brown5, Kevin Nguyen6, Stefan Vasile6, Eigo Suyama6, Layton H Smith6, Eduard Sergienko5, Anthony B Pinkerton5, Thomas D Y Chung5, Amy E Palmer4, Ian Pass5, Sonja Hess2, Seth M Cohen3, Raymond J Deshaies1,7.   

Abstract

The proteasome is a vital cellular machine that maintains protein homeostasis, which is of particular importance in multiple myeloma and possibly other cancers. Targeting of proteasome 20S peptidase activity with bortezomib and carfilzomib has been widely used to treat myeloma. However, not all patients respond to these compounds, and those who do eventually suffer relapse. Therefore, there is an urgent and unmet need to develop new drugs that target proteostasis through different mechanisms. We identified quinoline-8-thiol (8TQ) as a first-in-class inhibitor of the proteasome 19S subunit Rpn11. A derivative of 8TQ, capzimin, shows >5-fold selectivity for Rpn11 over the related JAMM proteases and >2 logs selectivity over several other metalloenzymes. Capzimin stabilized proteasome substrates, induced an unfolded protein response, and blocked proliferation of cancer cells, including those resistant to bortezomib. Proteomic analysis revealed that capzimin stabilized a subset of polyubiquitinated substrates. Identification of capzimin offers an alternative path to develop proteasome inhibitors for cancer therapy.

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Year:  2017        PMID: 28244987      PMCID: PMC5570473          DOI: 10.1038/nchembio.2326

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN: 1552-4450            Impact factor:   15.040


  57 in total

1.  Metalloprotein-inhibitor binding: human carbonic anhydrase II as a model for probing metal-ligand interactions in a metalloprotein active site.

Authors:  David P Martin; Zachary S Hann; Seth M Cohen
Journal:  Inorg Chem       Date:  2013-05-24       Impact factor: 5.165

2.  ETD Outperforms CID and HCD in the Analysis of the Ubiquitylated Proteome.

Authors:  Tanya R Porras-Yakushi; Michael J Sweredoski; Sonja Hess
Journal:  J Am Soc Mass Spectrom       Date:  2015-05-21       Impact factor: 3.109

3.  Inhibition of proteasome deubiquitinating activity as a new cancer therapy.

Authors:  Pádraig D'Arcy; Slavica Brnjic; Maria Hägg Olofsson; Mårten Fryknäs; Kristina Lindsten; Michelandrea De Cesare; Paola Perego; Behnam Sadeghi; Moustapha Hassan; Rolf Larsson; Stig Linder
Journal:  Nat Med       Date:  2011-11-06       Impact factor: 53.440

4.  Proteasome inhibition leads to a heat-shock response, induction of endoplasmic reticulum chaperones, and thermotolerance.

Authors:  K T Bush; A L Goldberg; S K Nigam
Journal:  J Biol Chem       Date:  1997-04-04       Impact factor: 5.157

5.  Crystal structure of the proteasomal deubiquitylation module Rpn8-Rpn11.

Authors:  Ganesh Ramnath Pathare; István Nagy; Paweł Śledź; Daniel J Anderson; Han-Jie Zhou; Els Pardon; Jan Steyaert; Friedrich Förster; Andreas Bracher; Wolfgang Baumeister
Journal:  Proc Natl Acad Sci U S A       Date:  2014-02-10       Impact factor: 11.205

6.  Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.

Authors:  Namrata D Udeshi; Tanya Svinkina; Philipp Mertins; Eric Kuhn; D R Mani; Jana W Qiao; Steven A Carr
Journal:  Mol Cell Proteomics       Date:  2012-12-24       Impact factor: 5.911

7.  RAP80 targets BRCA1 to specific ubiquitin structures at DNA damage sites.

Authors:  Bijan Sobhian; Genze Shao; Dana R Lilli; Aedín C Culhane; Lisa A Moreau; Bing Xia; David M Livingston; Roger A Greenberg
Journal:  Science       Date:  2007-05-25       Impact factor: 47.728

8.  Quantitative cell-based protein degradation assays to identify and classify drugs that target the ubiquitin-proteasome system.

Authors:  Tsui-Fen Chou; Raymond J Deshaies
Journal:  J Biol Chem       Date:  2011-02-22       Impact factor: 5.157

9.  AMSH is an endosome-associated ubiquitin isopeptidase.

Authors:  John McCullough; Michael J Clague; Sylvie Urbé
Journal:  J Cell Biol       Date:  2004-08-16       Impact factor: 10.539

10.  Higher-Order Assembly of BRCC36-KIAA0157 Is Required for DUB Activity and Biological Function.

Authors:  Elton Zeqiraj; Lei Tian; Christopher A Piggott; Monica C Pillon; Nicole M Duffy; Derek F Ceccarelli; Alexander F A Keszei; Kristina Lorenzen; Igor Kurinov; Stephen Orlicky; Gerald D Gish; Albert J R Heck; Alba Guarné; Roger A Greenberg; Frank Sicheri
Journal:  Mol Cell       Date:  2015-09-03       Impact factor: 17.970

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  51 in total

1.  A Bioinorganic Approach to Fragment-Based Drug Discovery Targeting Metalloenzymes.

Authors:  Seth M Cohen
Journal:  Acc Chem Res       Date:  2017-07-17       Impact factor: 22.384

2.  Discovery of an Inhibitor of the Proteasome Subunit Rpn11.

Authors:  Christian Perez; Jing Li; Francesco Parlati; Matthieu Rouffet; Yuyong Ma; Andrew L Mackinnon; Tsui-Fen Chou; Raymond J Deshaies; Seth M Cohen
Journal:  J Med Chem       Date:  2017-02-13       Impact factor: 7.446

Review 3.  Small-Molecule Inhibitors of the Proteasome's Regulatory Particle.

Authors:  Christine S Muli; Wenzhi Tian; Darci J Trader
Journal:  Chembiochem       Date:  2019-05-24       Impact factor: 3.164

Review 4.  Targeting Metalloenzymes for Therapeutic Intervention.

Authors:  Allie Y Chen; Rebecca N Adamek; Benjamin L Dick; Cy V Credille; Christine N Morrison; Seth M Cohen
Journal:  Chem Rev       Date:  2018-09-07       Impact factor: 60.622

Review 5.  Discovering proteasomal deubiquitinating enzyme inhibitors for cancer therapy: lessons from rational design, nature and old drug reposition.

Authors:  Kush Patel; Zainab So Ahmed; Xuemei Huang; Qianqian Yang; Elmira Ekinci; Christine M Neslund-Dudas; Bharati Mitra; Fawzy Aem Elnady; Young-Hoon Ahn; Huanjie Yang; Jinbao Liu; Qing Ping Dou
Journal:  Future Med Chem       Date:  2018-08-01       Impact factor: 3.808

6.  Physical and Functional Analysis of the Putative Rpn13 Inhibitor RA190.

Authors:  Paige Dickson; Daniel Abegg; Ekaterina Vinogradova; Junichiro Takaya; Hongchan An; Scott Simanski; Benjamin F Cravatt; Alexander Adibekian; Thomas Kodadek
Journal:  Cell Chem Biol       Date:  2020-08-27       Impact factor: 8.116

7.  Cand1-Mediated Adaptive Exchange Mechanism Enables Variation in F-Box Protein Expression.

Authors:  Xing Liu; Justin M Reitsma; Jennifer L Mamrosh; Yaru Zhang; Ronny Straube; Raymond J Deshaies
Journal:  Mol Cell       Date:  2018-03-01       Impact factor: 17.970

8.  Deubiquitinases Maintain Protein Homeostasis and Survival of Cancer Cells upon Glutathione Depletion.

Authors:  Isaac S Harris; Jennifer E Endress; Jonathan L Coloff; Laura M Selfors; Samuel K McBrayer; Jennifer M Rosenbluth; Nobuaki Takahashi; Sabin Dhakal; Vidyasagar Koduri; Matthew G Oser; Nathan J Schauer; Laura M Doherty; Andrew L Hong; Yun Pyo Kang; Scott T Younger; John G Doench; William C Hahn; Sara J Buhrlage; Gina M DeNicola; William G Kaelin; Joan S Brugge
Journal:  Cell Metab       Date:  2019-02-21       Impact factor: 27.287

9.  Epidithiodiketopiperazines Inhibit Protein Degradation by Targeting Proteasome Deubiquitinase Rpn11.

Authors:  Jing Li; Yaru Zhang; Bruno Da Silva Sil Dos Santos; Feng Wang; Yuyong Ma; Christian Perez; Yanling Yang; Junmin Peng; Seth M Cohen; Tsui-Fen Chou; Stephen T Hilton; Raymond J Deshaies
Journal:  Cell Chem Biol       Date:  2018-08-23       Impact factor: 8.116

Review 10.  Understanding the 26S proteasome molecular machine from a structural and conformational dynamics perspective.

Authors:  Eric R Greene; Ken C Dong; Andreas Martin
Journal:  Curr Opin Struct Biol       Date:  2019-11-26       Impact factor: 6.809

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