Literature DB >> 28244589

Mechanistic kinetic models of enzymatic cellulose hydrolysis-A review.

Tina Jeoh1, Maria J Cardona2,3, Nardrapee Karuna1,4, Akshata R Mudinoor1, Jennifer Nill2.   

Abstract

Bioconversion of lignocellulose forms the basis for renewable, advanced biofuels, and bioproducts. Mechanisms of hydrolysis of cellulose by cellulases have been actively studied for nearly 70 years with significant gains in understanding of the cellulolytic enzymes. Yet, a full mechanistic understanding of the hydrolysis reaction has been elusive. We present a review to highlight new insights gained since the most recent comprehensive review of cellulose hydrolysis kinetic models by Bansal et al. (2009) Biotechnol Adv 27:833-848. Recent models have taken a two-pronged approach to tackle the challenge of modeling the complex heterogeneous reaction-an enzyme-centric modeling approach centered on the molecularity of the cellulase-cellulose interactions to examine rate limiting elementary steps and a substrate-centric modeling approach aimed at capturing the limiting property of the insoluble cellulose substrate. Collectively, modeling results suggest that at the molecular-scale, how rapidly cellulases can bind productively (complexation) and release from cellulose (decomplexation) is limiting, while the overall hydrolysis rate is largely insensitive to the catalytic rate constant. The surface area of the insoluble substrate and the degrees of polymerization of the cellulose molecules in the reaction both limit initial hydrolysis rates only. Neither enzyme-centric models nor substrate-centric models can consistently capture hydrolysis time course at extended reaction times. Thus, questions of the true reaction limiting factors at extended reaction times and the role of complexation and decomplexation in rate limitation remain unresolved. Biotechnol. Bioeng. 2017;114: 1369-1385.
© 2017 Wiley Periodicals, Inc. © 2017 Wiley Periodicals, Inc.

Entities:  

Keywords:  cellulase-cellulose interactions; cellulases; cellulose hydrolysis mechanism; cellulose structure; complexation and decomplexation; rate-limiting cellulose property

Mesh:

Substances:

Year:  2017        PMID: 28244589     DOI: 10.1002/bit.26277

Source DB:  PubMed          Journal:  Biotechnol Bioeng        ISSN: 0006-3592            Impact factor:   4.530


  15 in total

1.  Substrate binding in the processive cellulase Cel7A: Transition state of complexation and roles of conserved tryptophan residues.

Authors:  Nanna Røjel; Jeppe Kari; Trine Holst Sørensen; Silke F Badino; J Preben Morth; Kay Schaller; Ana Mafalda Cavaleiro; Kim Borch; Peter Westh
Journal:  J Biol Chem       Date:  2019-12-17       Impact factor: 5.157

2.  Insights into Glucose-6-phosphate Allosteric Activation of β-Glucosidase A.

Authors:  Anderson A Gomes; Gustavo F da Silva; Sirish K Lakkaraju; Beatriz Gomes Guimarães; Alexander D MacKerell; Maria de Lourdes B Magalhães
Journal:  J Chem Inf Model       Date:  2021-04-05       Impact factor: 4.956

3.  Cellulose-binding activity of a 21-kDa endo-ß-1,4-glucanase lacking cellulose-binding domain and its synergy with other cellulases in the digestive fluid of Aplysia kurodai.

Authors:  Akihiko Tsuji; Keizo Yuasa; Chikako Asada
Journal:  PLoS One       Date:  2018-11-09       Impact factor: 3.240

4.  Developing fast enzyme recycling strategy through elucidating enzyme adsorption kinetics on alkali and acid pretreated corn stover.

Authors:  Ye Yuan; Rui Zhai; Ying Li; Xiangxue Chen; Mingjie Jin
Journal:  Biotechnol Biofuels       Date:  2018-11-20       Impact factor: 6.040

5.  Modeling the activity burst in the initial phase of cellulose hydrolysis by the processive cellobiohydrolase Cel7A.

Authors:  Zdeneˇk Petrášek; Manuel Eibinger; Bernd Nidetzky
Journal:  Biotechnol Bioeng       Date:  2019-01-08       Impact factor: 4.530

6.  Development of modified HCH-1 kinetic model for long-term enzymatic cellulose hydrolysis and comparison with literature models.

Authors:  Chao Liang; Chao Gu; Jonathan Raftery; M Nazmul Karim; Mark Holtzapple
Journal:  Biotechnol Biofuels       Date:  2019-02-18       Impact factor: 6.040

Review 7.  Biomethane Production From Lignocellulose: Biomass Recalcitrance and Its Impacts on Anaerobic Digestion.

Authors:  Ning Xu; Shixun Liu; Fengxue Xin; Jie Zhou; Honghua Jia; Jiming Xu; Min Jiang; Weiliang Dong
Journal:  Front Bioeng Biotechnol       Date:  2019-08-08

8.  Interfacial molecular interactions of cellobiohydrolase Cel7A and its variants on cellulose.

Authors:  Akshata R Mudinoor; Peter M Goodwin; Raghavendra U Rao; Nardrapee Karuna; Alex Hitomi; Jennifer Nill; Tina Jeoh
Journal:  Biotechnol Biofuels       Date:  2020-01-18       Impact factor: 6.040

9.  Analysis of the phosphorylome of trichoderma reesei cultivated on sugarcane bagasse suggests post-translational regulation of the secreted glycosyl hydrolase Cel7A.

Authors:  Wellington Ramos Pedersoli; Renato Graciano de Paula; Amanda Cristina Campos Antoniêto; Cláudia Batista Carraro; Iasmin Cartaxo Taveira; David Batista Maués; Maíra Pompeu Martins; Liliane Fraga Costa Ribeiro; André Ricardo de Lima Damasio; Rafael Silva-Rocha; Antônio Rossi Filho; Roberto N Silva
Journal:  Biotechnol Rep (Amst)       Date:  2021-06-22

10.  From nano- to micrometer scale: the role of microwave-assisted acid and alkali pretreatments in the sugarcane biomass structure.

Authors:  Augusta Isaac; Jéssica de Paula; Carlos Martins Viana; Andréia Bicalho Henriques; Angelo Malachias; Luciano A Montoro
Journal:  Biotechnol Biofuels       Date:  2018-03-22       Impact factor: 6.040

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.