Literature DB >> 28243951

The current status of cyanobacterial nomenclature under the "prokaryotic" and the "botanical" code.

Aharon Oren1, Stefano Ventura2.   

Abstract

Cyanobacterial taxonomy developed in the botanical world because Cyanobacteria/Cyanophyta have traditionally been identified as algae. However, they possess a prokaryotic cell structure, and phylogenetically they belong to the Bacteria. This caused nomenclature problems as the provisions of the International Code of Nomenclature for algae, fungi, and plants (ICN; the "Botanical Code") differ from those of the International Code of Nomenclature of Prokaryotes (ICNP; the "Prokaryotic Code"). While the ICN recognises names validly published under the ICNP, Article 45(1) of the ICN has not yet been reciprocated in the ICNP. Different solutions have been proposed to solve the current problems. In 2012 a Special Committee on the harmonisation of the nomenclature of Cyanobacteria was appointed, but its activity has been minimal. Two opposing proposals to regulate cyanobacterial nomenclature were recently submitted, one calling for deletion of the cyanobacteria from the groups of organisms whose nomenclature is regulated by the ICNP, the second to consistently apply the rules of the ICNP to all cyanobacteria. Following a general overview of the current status of cyanobacterial nomenclature under the two codes we present five case studies of genera for which nomenclatural aspects have been discussed in recent years: Microcystis, Planktothrix, Halothece, Gloeobacter and Nostoc.

Entities:  

Keywords:  Cyanobacteria; Gloeobacter; Halothece; Nomenclature; Nostoc; Planktothrix

Mesh:

Year:  2017        PMID: 28243951     DOI: 10.1007/s10482-017-0848-0

Source DB:  PubMed          Journal:  Antonie Van Leeuwenhoek        ISSN: 0003-6072            Impact factor:   2.271


  5 in total

1.  Uncultivated microbes-in need of their own nomenclature?

Authors:  Aharon Oren; George M Garrity
Journal:  ISME J       Date:  2017-10-20       Impact factor: 11.217

2.  Ecogenomics and Taxonomy of Cyanobacteria Phylum.

Authors:  Juline M Walter; Felipe H Coutinho; Bas E Dutilh; Jean Swings; Fabiano L Thompson; Cristiane C Thompson
Journal:  Front Microbiol       Date:  2017-11-14       Impact factor: 5.640

3.  Filling the Gaps in the Cyanobacterial Tree of Life-Metagenome Analysis of Stigonema ocellatum DSM 106950, Chlorogloea purpurea SAG 13.99 and Gomphosphaeria aponina DSM 107014.

Authors:  Pia Marter; Sixing Huang; Henner Brinkmann; Silke Pradella; Michael Jarek; Manfred Rohde; Boyke Bunk; Jörn Petersen
Journal:  Genes (Basel)       Date:  2021-03-09       Impact factor: 4.096

4.  Genome sequencing of the NIES Cyanobacteria collection with a focus on the heterocyst-forming clade.

Authors:  Yuu Hirose; Yoshiyuki Ohtsubo; Naomi Misawa; Chinatsu Yonekawa; Nobuyoshi Nagao; Yohei Shimura; Takatomo Fujisawa; Yu Kanesaki; Hiroshi Katoh; Mitsunori Katayama; Haruyo Yamaguchi; Hirofumi Yoshikawa; Masahiko Ikeuchi; Toshihiko Eki; Yasukazu Nakamura; Masanobu Kawachi
Journal:  DNA Res       Date:  2021-10-11       Impact factor: 4.458

5.  Day and Night: Metabolic Profiles and Evolutionary Relationships of Six Axenic Non-Marine Cyanobacteria.

Authors:  Sabine Eva Will; Petra Henke; Christian Boedeker; Sixing Huang; Henner Brinkmann; Manfred Rohde; Michael Jarek; Thomas Friedl; Steph Seufert; Martin Schumacher; Jörg Overmann; Meina Neumann-Schaal; Jörn Petersen
Journal:  Genome Biol Evol       Date:  2019-01-01       Impact factor: 3.416

  5 in total

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