Literature DB >> 28242534

Genome sequencing supports a multi-vertex model for Brassiceae species.

Feng Cheng1, Jianli Liang1, Chengcheng Cai1, Xu Cai1, Jian Wu1, Xiaowu Wang2.   

Abstract

The economically important Brassica genus is a good system for studying the evolution of polyploids. Brassica genomes have undergone whole genome triplication (WGT). Subgenome dominance phenomena such as biased gene fractionation and dominant gene expression were observed in tripled genomes of Brassica. The genome of radish (Raphanus sativus), another important crop of tribe Brassiceae, was derived from the same WGT event and shows similar subgenome dominance. These findings and molecular dating indicate that radish occupies a similar evolutionary origin as that of Brassica species. Here, we extended the Brassica "triangle of U" to a multi-vertex model. This model describes the relationships or the potential of using more Brassiceae mesohexaploids in the creation of new allotetraploid oil or vegetable crop species.
Copyright © 2017 Elsevier Ltd. All rights reserved.

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Year:  2017        PMID: 28242534     DOI: 10.1016/j.pbi.2017.01.006

Source DB:  PubMed          Journal:  Curr Opin Plant Biol        ISSN: 1369-5266            Impact factor:   7.834


  12 in total

1.  An improved Raphanus sativus cv. WK10039 genome localizes centromeres, uncovers variation of DNA methylation and resolves arrangement of the ancestral Brassica genome blocks in radish chromosomes.

Authors:  Ara Cho; Hoyeol Jang; Seunghoon Baek; Moon-Jin Kim; Bomi Yim; Sunmi Huh; Song-Hwa Kwon; Hee-Ju Yu; Jeong-Hwan Mun
Journal:  Theor Appl Genet       Date:  2022-03-06       Impact factor: 5.699

2.  Mapping and identification of a new potential dominant resistance gene to turnip mosaic virus in Brassica rapa.

Authors:  Xinxin Lu; Ze Li; Wenyue Huang; Shaoxing Wang; Shifan Zhang; Fei Li; Hui Zhang; Rifei Sun; Guoliang Li; Shujiang Zhang
Journal:  Planta       Date:  2022-08-29       Impact factor: 4.540

3.  Comparison of the cytoplastic genomes by resequencing: insights into the genetic diversity and the phylogeny of the agriculturally important genus Brassica.

Authors:  Jiangwei Qiao; Xiaojun Zhang; Biyun Chen; Fei Huang; Kun Xu; Qian Huang; Yi Huang; Qiong Hu; Xiaoming Wu
Journal:  BMC Genomics       Date:  2020-07-13       Impact factor: 3.969

4.  An ultra-high-density genetic map provides insights into genome synteny, recombination landscape and taproot skin colour in radish (Raphanus sativus L.).

Authors:  Xiaobo Luo; Liang Xu; Yan Wang; Junhui Dong; Yinglong Chen; Mingjia Tang; Lianxue Fan; Yuelin Zhu; Liwang Liu
Journal:  Plant Biotechnol J       Date:  2019-07-04       Impact factor: 9.803

5.  A chromosome-scale assembly of allotetraploid Brassica juncea (AABB) elucidates comparative architecture of the A and B genomes.

Authors:  Kumar Paritosh; Satish Kumar Yadava; Priyansha Singh; Latika Bhayana; Arundhati Mukhopadhyay; Vibha Gupta; Naveen Chandra Bisht; Jianwei Zhang; David A Kudrna; Dario Copetti; Rod A Wing; Vijaya Bhasker Reddy Lachagari; Akshay Kumar Pradhan; Deepak Pental
Journal:  Plant Biotechnol J       Date:  2020-12-30       Impact factor: 9.803

6.  The impacts of allopolyploidization on Methyl-CpG-Binding Domain (MBD) gene family in Brassica napus.

Authors:  Yafang Xiao; Mengdi Li; Jianbo Wang
Journal:  BMC Plant Biol       Date:  2022-03-07       Impact factor: 4.215

7.  Impacts of allopolyploidization and structural variation on intraspecific diversification in Brassica rapa.

Authors:  Xu Cai; Lichun Chang; Tingting Zhang; Haixu Chen; Lei Zhang; Runmao Lin; Jianli Liang; Jian Wu; Michael Freeling; Xiaowu Wang
Journal:  Genome Biol       Date:  2021-05-31       Impact factor: 13.583

8.  Re-exploration of U's Triangle Brassica Species Based on Chloroplast Genomes and 45S nrDNA Sequences.

Authors:  Chang-Kug Kim; Young-Joo Seol; Sampath Perumal; Jonghoon Lee; Nomar Espinosa Waminal; Murukarthick Jayakodi; Sang-Choon Lee; Seungwoo Jin; Beom-Soon Choi; Yeisoo Yu; Ho-Cheol Ko; Ji-Weon Choi; Kyoung-Yul Ryu; Seong-Han Sohn; Isobel Parkin; Tae-Jin Yang
Journal:  Sci Rep       Date:  2018-05-09       Impact factor: 4.379

Review 9.  Understanding of MYB Transcription Factors Involved in Glucosinolate Biosynthesis in Brassicaceae.

Authors:  Mi-Suk Seo; Jung Sun Kim
Journal:  Molecules       Date:  2017-09-14       Impact factor: 4.411

10.  Genome-Wide Analysis of Phosphorus Transporter Genes in Brassica and Their Roles in Heavy Metal Stress Tolerance.

Authors:  Yuanyuan Wan; Zhen Wang; Jichun Xia; Shulin Shen; Mingwei Guan; Meichen Zhu; Cailin Qiao; Fujun Sun; Ying Liang; Jiana Li; Kun Lu; Cunmin Qu
Journal:  Int J Mol Sci       Date:  2020-03-23       Impact factor: 5.923

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