Literature DB >> 2824194

Structural models of the redox centres in cytochrome oxidase.

L Holm1, M Saraste, M Wikström.   

Abstract

Evolutionary conservation, predicted membrane topography of the subunits, and known chemical and physical properties of the catalytic metals in cytochrome oxidase provided the basis for plausible structural models of the enzyme's redox centres. Subunit II probably binds one of the copper ions (CuA) whilst subunit I is likely to bind the two haems (a and a3) and the other redox-active copper (CuB). Two cysteine and two histidine residues of subunit II are the likely ligands of CuA, forming a centre that may be structurally similar to that in azurin. The two haems may be sandwiched between two transmembranous segments of subunit I, one of which also provides a histidine ligand to CuB. A third segment may provide two more histidine ligands to the latter. The model was constructed with a 4 A Fe-Cu distance in the binuclear haem a3-CuB centre, and a 14 A distance between the haem irons. The subunit I model involves only three transmembranous helices which bind three catalytic metal groups. The fit of this model to several known physicochemical properties of the redox centres is analysed.

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Year:  1987        PMID: 2824194      PMCID: PMC553708          DOI: 10.1002/j.1460-2075.1987.tb02578.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  36 in total

Review 1.  Proton-pumping cytochrome c oxidase.

Authors:  M Wikström; K Krab
Journal:  Biochim Biophys Acta       Date:  1979-08-17

2.  The location of redox centers in biological membranes determined by resonance x-ray diffraction. II. Analysis of the resonance diffraction data.

Authors:  J K Blasie; J M Pachence; A Tavormina; M Erecinska; P L Dutton; J Stamatoff; P Eisenberger; G Brown
Journal:  Biochim Biophys Acta       Date:  1982-02-17

3.  Interaction in cytochrome c oxidase between cytochrome a3 ligated with nitric oxide and cytochrome a.

Authors:  R Mascarenhas; Y H Wei; C P Scholes; T E King
Journal:  J Biol Chem       Date:  1983-05-10       Impact factor: 5.157

4.  Redox-linked hydrogen bond strength changes in cytochrome a: implications for a cytochrome oxidase proton pump.

Authors:  G T Babcock; P M Callahan
Journal:  Biochemistry       Date:  1983-05-10       Impact factor: 3.162

5.  A simple method for displaying the hydropathic character of a protein.

Authors:  J Kyte; R F Doolittle
Journal:  J Mol Biol       Date:  1982-05-05       Impact factor: 5.469

6.  Structural aspects of the copper sites in cytochrome c oxidase. An X-ray absorption spectroscopic investigation of the resting-state enzyme.

Authors:  R A Scott; J R Schwartz; S P Cramer
Journal:  Biochemistry       Date:  1986-09-23       Impact factor: 3.162

7.  Sequence homology and structural similarity between cytochrome b of mitochondrial complex III and the chloroplast b6-f complex: position of the cytochrome b hemes in the membrane.

Authors:  W R Widger; W A Cramer; R G Herrmann; A Trebst
Journal:  Proc Natl Acad Sci U S A       Date:  1984-02       Impact factor: 11.205

8.  A two-subunit cytochrome c oxidase (cytochrome aa3) from Paracoccus dentrificans.

Authors:  B Ludwig; G Schatz
Journal:  Proc Natl Acad Sci U S A       Date:  1980-01       Impact factor: 11.205

9.  Coordination environment for the type 3 copper center of tree laccase and CuB of cytochrome c oxidase as determined by electron nuclear double resonance.

Authors:  J Cline; B Reinhammar; P Jensen; R Venters; B M Hoffman
Journal:  J Biol Chem       Date:  1983-04-25       Impact factor: 5.157

10.  Isolation and analysis of the genes for cytochrome c oxidase in Paracoccus denitrificans.

Authors:  M Raitio; T Jalli; M Saraste
Journal:  EMBO J       Date:  1987-09       Impact factor: 11.598

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  33 in total

1.  Cytochrome aa(3) in Haloferax volcanii.

Authors:  Mikiei Tanaka; Naohide Ogawa; Kunio Ihara; Yasuo Sugiyama; Yasuo Mukohata
Journal:  J Bacteriol       Date:  2002-02       Impact factor: 3.490

2.  Unraveling the role of metal ions and low catalytic activity of cytochrome C oxidase in Alzheimer's disease.

Authors:  Trevor Alleyne; Neetu Mohan; Jerome Joseph; Andrew Adogwa
Journal:  J Mol Neurosci       Date:  2010-08-20       Impact factor: 3.444

3.  Molecular evolution at the cytochrome oxidase subunit 2 gene among divergent populations of the intertidal copepod, Tigriopus californicus.

Authors:  Paul D Rawson; Ronald S Burton
Journal:  J Mol Evol       Date:  2006-04-28       Impact factor: 2.395

Review 4.  Cytochrome oxidase as a proton pump.

Authors:  M T Wilson; D Bickar
Journal:  J Bioenerg Biomembr       Date:  1991-10       Impact factor: 2.945

Review 5.  Cytochrome c oxidase in Paracoccus denitrificans. Protein, chemical, structural, and evolutionary aspects.

Authors:  G Buse; G C Steffens
Journal:  J Bioenerg Biomembr       Date:  1991-04       Impact factor: 2.945

6.  A predictor of transmembrane alpha-helix domains of proteins based on neural networks.

Authors:  R Casadio; P Fariselli; C Taroni; M Compiani
Journal:  Eur Biophys J       Date:  1996       Impact factor: 1.733

Review 7.  Biogenesis of respiratory cytochromes in bacteria.

Authors:  L Thöny-Meyer
Journal:  Microbiol Mol Biol Rev       Date:  1997-09       Impact factor: 11.056

8.  Redox analysis of the cytochrome o-type quinol oxidase complex of Escherichia coli reveals three redox components.

Authors:  B Bolgiano; I Salmon; W J Ingledew; R K Poole
Journal:  Biochem J       Date:  1991-03-15       Impact factor: 3.857

9.  Investigation of the electron-transfer properties of cytochrome c oxidase covalently cross-linked to Fe- or Zn-containing cytochrome c.

Authors:  T A Alleyne; M T Wilson; G Antonini; F Malatesta; B Vallone; P Sarti; M Brunori
Journal:  Biochem J       Date:  1992-11-01       Impact factor: 3.857

10.  Characterization of a cytochrome a1 that functions as a ubiquinol oxidase in Acetobacter aceti.

Authors:  M Fukaya; K Tayama; T Tamaki; H Ebisuya; H Okumura; Y Kawamura; S Horinouchi; T Beppu
Journal:  J Bacteriol       Date:  1993-07       Impact factor: 3.490

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