Literature DB >> 28239305

Comparative analysis of system identification techniques for nonlinear modeling of the neuron-microelectrode junction.

Saad Ahmad Khan1, Vaibhav Thakore2, Aman Behal3, Ladislau Bölöni1, James J Hickman4.   

Abstract

Applications of non-invasive neuroelectronic interfacing in the fields of whole-cell biosensing, biological computation and neural prosthetic devices depend critically on an efficient decoding and processing of information retrieved from a neuron-electrode junction. This necessitates development of mathematical models of the neuron-electrode interface that realistically represent the extracellular signals recorded at the neuroelectronic junction without being computationally expensive. Extracellular signals recorded using planar microelectrode or field effect transistor arrays have, until now, primarily been represented using linear equivalent circuit models that fail to reproduce the correct amplitude and shape of the signals recorded at the neuron-microelectrode interface. In this paper, to explore viable alternatives for a computationally inexpensive and efficient modeling of the neuron-electrode junction, input-output data from the neuron-electrode junction is modeled using a parametric Wiener model and a Nonlinear Auto-Regressive network with eXogenous input trained using a dynamic Neural Network model (NARX-NN model). Results corresponding to a validation dataset from these models are then employed to compare and contrast the computational complexity and efficiency of the aforementioned modeling techniques with the Lee-Schetzen technique of cross-correlation for estimating a nonlinear dynamic model of the neuroelectronic junction.

Entities:  

Keywords:  Microelectrode array; NARX model; Wiener model; neural network; neuroelectronic interface; neuron-electrode junction

Year:  2013        PMID: 28239305      PMCID: PMC5322820          DOI: 10.1166/jctn.2013.2736

Source DB:  PubMed          Journal:  J Comput Theor Nanosci        ISSN: 1546-1955


  13 in total

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2.  Cell-transistor coupling: investigation of potassium currents recorded with p- and n-channel FETs.

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Journal:  Biophys J       Date:  2005-08-12       Impact factor: 4.033

3.  Toxin detection based on action potential shape analysis using a realistic mathematical model of differentiated NG108-15 cells.

Authors:  Dinesh K Mohan; Peter Molnar; James J Hickman
Journal:  Biosens Bioelectron       Date:  2006-02-03       Impact factor: 10.618

4.  Interfacing neurons with carbon nanotubes: electrical signal transfer and synaptic stimulation in cultured brain circuits.

Authors:  Andrea Mazzatenta; Michele Giugliano; Stephane Campidelli; Luca Gambazzi; Luca Businaro; Henry Markram; Maurizio Prato; Laura Ballerini
Journal:  J Neurosci       Date:  2007-06-27       Impact factor: 6.167

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Journal:  IEEE Trans Neural Netw       Date:  1994

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Authors:  M Pabst; G Wrobel; S Ingebrandt; F Sommerhage; A Offenhäusser
Journal:  Eur Phys J E Soft Matter       Date:  2007-08-29       Impact factor: 1.890

7.  On the chemical modification of pacemaker electrodes and patterned surface functionalization of planar substrates.

Authors:  M Stelzle; R Wagner; W Nisch; W Jägermann; R Fröhlich; M Schaldach
Journal:  Biosens Bioelectron       Date:  1997       Impact factor: 10.618

8.  Bradykinin-activated transmembrane signals are coupled via No or Ni to production of inositol 1,4,5-trisphosphate, a second messenger in NG108-15 neuroblastoma-glioma hybrid cells.

Authors:  H Higashida; R A Streaty; W Klee; M Nirenberg
Journal:  Proc Natl Acad Sci U S A       Date:  1986-02       Impact factor: 11.205

9.  Response characteristics of single-cell impedance sensors employed with surface-modified microelectrodes.

Authors:  Myo Thein; Fareid Asphahani; An Cheng; Ryan Buckmaster; Miqin Zhang; Jian Xu
Journal:  Biosens Bioelectron       Date:  2010-01-25       Impact factor: 10.618

10.  A new target for amyloid beta toxicity validated by standard and high-throughput electrophysiology.

Authors:  Kucku Varghese; Peter Molnar; Mainak Das; Neelima Bhargava; Stephen Lambert; Mark S Kindy; James J Hickman
Journal:  PLoS One       Date:  2010-01-08       Impact factor: 3.240

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