Literature DB >> 28236744

Identification of potential inhibitors against the Zika virus using consensus scoring.

Abdulmujeeb T Onawole1, Kazeem O Sulaiman2, Rukayat O Adegoke3, Temitope U Kolapo4.   

Abstract

The Zika virus (ZIKV) is a life threatening pathogen of zoonotic importance with prevalence in some parts of Africa and America. Unfortunately, there is yet to be a single approved vaccine or antiviral drug to treat the diseases and deformations being caused by the Zika virus infection. In this study, about 36 million compounds from MCULE database were virtually screened against a real matured ZIKV protein using a consensus scoring method to get improved hit rates. The consensus scoring method combined the result from the 25 top ranked molecules from both MCULE and Drug Score eXtended (DSX) docking programs which led to the selection of two hit compounds. The inhibition constant (Ki) values of 0.08 and 0.30μm were obtained for the two selected compounds MCULE-8830369631-0-1 and MCULE-9236850811-0-1 respectively, to remark them as hit compounds. The molecular interactions of the two selected hit compounds with the amino acids (ALA 48, ILE 49, ILE 468 and LEU 472) present in the ZIKV protein indicated that they both have similar binding modes. The result of the computationally predicted physicochemical properties including ADMET for the selected compounds showed their great potential in becoming lead compounds upon optimization and thus could be used in treating the Zika virus diseases.
Copyright © 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Consensus scoring; Molecular docking; Virtual screening; Zika virus; Zoonotic disease

Mesh:

Substances:

Year:  2017        PMID: 28236744     DOI: 10.1016/j.jmgm.2017.01.018

Source DB:  PubMed          Journal:  J Mol Graph Model        ISSN: 1093-3263            Impact factor:   2.518


  6 in total

Review 1.  Advances in Developing Therapies to Combat Zika Virus: Current Knowledge and Future Perspectives.

Authors:  Ashok Munjal; Rekha Khandia; Kuldeep Dhama; Swati Sachan; Kumaragurubaran Karthik; Ruchi Tiwari; Yashpal S Malik; Deepak Kumar; Raj K Singh; Hafiz M N Iqbal; Sunil K Joshi
Journal:  Front Microbiol       Date:  2017-08-03       Impact factor: 5.640

2.  Computational Screening of Potential Inhibitors of Desulfobacter postgatei for Pyrite Scale Prevention in Oil and Gas Wells.

Authors:  Abdulmujeeb T Onawole; Ibnelwaleed A Hussein; Mohammed A Saad; Musa E M Ahmed; Hassan Nimir
Journal:  ACS Omega       Date:  2021-04-13

3.  Exploring the inhibitory potentials of Momordica charantia bioactive compounds against Keap1-Kelch protein using computational approaches.

Authors:  Temitope Isaac Adelusi; Misbaudeen Abdul-Hammed; Mukhtar Oluwaseun Idris; Oyedele Qudus Kehinde; Ibrahim Damilare Boyenle; Ukachi Chiamaka Divine; Ibrahim Olaide Adedotun; Ajayi Ayodeji Folorunsho; Oladipo Elijah Kolawole
Journal:  In Silico Pharmacol       Date:  2021-06-25

4.  Flavonoids as Putative Epi-Modulators: Insight into Their Binding Mode with BRD4 Bromodomains Using Molecular Docking and Dynamics.

Authors:  Fernando D Prieto-Martínez; José L Medina-Franco
Journal:  Biomolecules       Date:  2018-07-23

Review 5.  Research Models and Tools for the Identification of Antivirals and Therapeutics against Zika Virus Infection.

Authors:  Marco P Alves; Nathalie J Vielle; Volker Thiel; Stephanie Pfaender
Journal:  Viruses       Date:  2018-10-30       Impact factor: 5.048

6.  COVID-19: CADD to the rescue.

Authors:  Abdulmujeeb T Onawole; Kazeem O Sulaiman; Temitope U Kolapo; Fatimo O Akinde; Rukayat O Adegoke
Journal:  Virus Res       Date:  2020-05-15       Impact factor: 3.303

  6 in total

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