Literature DB >> 28235203

Epigenetic Memory Underlies Cell-Autonomous Heterogeneous Behavior of Hematopoietic Stem Cells.

Vionnie W C Yu, Rushdia Z Yusuf, Toshihiko Oki, Juwell Wu, Borja Saez, Xin Wang, Colleen Cook, Ninib Baryawno, Michael J Ziller, Eunjung Lee, Hongcang Gu, Alexander Meissner, Charles P Lin, Peter V Kharchenko, David T Scadden.   

Abstract

Entities:  

Year:  2017        PMID： 28235203      PMCID： PMC5510238          DOI： 10.1016/j.cell.2017.02.010

Source DB:  PubMed          Journal:  Cell        ISSN： 0092-8674            Impact factor:   41.582


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  43 in total

1.  Fast gapped-read alignment with Bowtie 2.

Authors:  Ben Langmead; Steven L Salzberg
Journal:  Nat Methods       Date:  2012-03-04       Impact factor: 28.547

2.  Myeloid-biased hematopoietic stem cells have extensive self-renewal capacity but generate diminished lymphoid progeny with impaired IL-7 responsiveness.

Authors:  Christa E Muller-Sieburg; Rebecca H Cho; Lars Karlsson; Jing-F Huang; Hans B Sieburg
Journal:  Blood       Date:  2004-02-19       Impact factor: 22.113

3.  Clonal and systemic analysis of long-term hematopoiesis in the mouse.

Authors:  C T Jordan; I R Lemischka
Journal:  Genes Dev       Date:  1990-02       Impact factor: 11.361

4.  Epigenomic profiling of young and aged HSCs reveals concerted changes during aging that reinforce self-renewal.

Authors:  Deqiang Sun; Min Luo; Mira Jeong; Benjamin Rodriguez; Zheng Xia; Rebecca Hannah; Hui Wang; Thuc Le; Kym F Faull; Rui Chen; Hongcang Gu; Christoph Bock; Alexander Meissner; Berthold Göttgens; Gretchen J Darlington; Wei Li; Margaret A Goodell
Journal:  Cell Stem Cell       Date:  2014-05-01       Impact factor: 24.633

5.  Clonal analysis reveals multiple functional defects of aged murine hematopoietic stem cells.

Authors:  Brad Dykstra; Sandra Olthof; Jaring Schreuder; Martha Ritsema; Gerald de Haan
Journal:  J Exp Med       Date:  2011-11-21       Impact factor: 14.307

6.  A novel cell-cycle-indicator, mVenus-p27K-, identifies quiescent cells and visualizes G0-G1 transition.

Authors:  Toshihiko Oki; Koutarou Nishimura; Jiro Kitaura; Katsuhiro Togami; Akie Maehara; Kumi Izawa; Asako Sakaue-Sawano; Atsushi Niida; Satoru Miyano; Hiroyuki Aburatani; Hiroshi Kiyonari; Atsushi Miyawaki; Toshio Kitamura
Journal:  Sci Rep       Date:  2014-02-06       Impact factor: 4.379

7.  Characterizing transcriptional heterogeneity through pathway and gene set overdispersion analysis.

Authors:  Jean Fan; Neeraj Salathia; Rui Liu; Gwendolyn E Kaeser; Yun C Yung; Joseph L Herman; Fiona Kaper; Jian-Bing Fan; Kun Zhang; Jerold Chun; Peter V Kharchenko
Journal:  Nat Methods       Date:  2016-01-18       Impact factor: 28.547

8.  Design and analysis of ChIP-seq experiments for DNA-binding proteins.

Authors:  Peter V Kharchenko; Michael Y Tolstorukov; Peter J Park
Journal:  Nat Biotechnol       Date:  2008-11-16       Impact factor: 54.908

9.  TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions.

Authors:  Daehwan Kim; Geo Pertea; Cole Trapnell; Harold Pimentel; Ryan Kelley; Steven L Salzberg
Journal:  Genome Biol       Date:  2013-04-25       Impact factor: 13.583

10.  Role of Tet proteins in enhancer activity and telomere elongation.

Authors:  Falong Lu; Yuting Liu; Lan Jiang; Shinpei Yamaguchi; Yi Zhang
Journal:  Genes Dev       Date:  2014-09-15       Impact factor: 11.361
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  26 in total

1.  Lineage tracing of murine adult hematopoietic stem cells reveals active contribution to steady-state hematopoiesis.

Authors:  Richard H Chapple; Yu-Jung Tseng; Tianyuan Hu; Ayumi Kitano; Makiko Takeichi; Kevin A Hoegenauer; Daisuke Nakada
Journal:  Blood Adv       Date:  2018-06-12

2.  Imaging the Vascular Bone Marrow Niche During Inflammatory Stress.

Authors:  Katrien Vandoorne; David Rohde; Hye-Yeong Kim; Gabriel Courties; Gregory Wojtkiewicz; Lisa Honold; Friedrich Felix Hoyer; Vanessa Frodermann; Ribhu Nayar; Fanny Herisson; Yookyung Jung; Pauline A Désogère; Claudio Vinegoni; Peter Caravan; Ralph Weissleder; David E Sosnovik; Charles P Lin; Filip K Swirski; Matthias Nahrendorf
Journal:  Circ Res       Date:  2018-08-03       Impact factor: 17.367

3.  Epigenetic and Transcriptomic Programming of HSC Quiescence Signaling in Large for Gestational Age Neonates.

Authors:  Alexandre Pelletier; Arnaud Carrier; Yongmei Zhao; Mickaël Canouil; Mehdi Derhourhi; Emmanuelle Durand; Lionel Berberian-Ferrato; John Greally; Francine Hughes; Philippe Froguel; Amélie Bonnefond; Fabien Delahaye
Journal:  Int J Mol Sci       Date:  2022-06-30       Impact factor: 6.208

4.  Lineage Plasticity in Cancer Progression and Treatment.

Authors:  Clémentine Le Magnen; Michael M Shen; Cory Abate-Shen
Journal:  Annu Rev Cancer Biol       Date:  2017-12-01

Review 5.  Haematopoietic stem cell self-renewal in vivo and ex vivo.

Authors:  Adam C Wilkinson; Kyomi J Igarashi; Hiromitsu Nakauchi
Journal:  Nat Rev Genet       Date:  2020-05-28       Impact factor: 53.242

Review 6.  Tracking the origin, development, and differentiation of hematopoietic stem cells.

Authors:  Priyanka R Dharampuriya; Giorgia Scapin; Colline Wong; K John Wagner; Jennifer L Cillis; Dhvanit I Shah
Journal:  Curr Opin Cell Biol       Date:  2018-02-02       Impact factor: 8.382

7.  Hematopoiesis by iPSC-derived hematopoietic stem cells of aplastic anemia that escape cytotoxic T-cell attack.

Authors:  J Luis Espinoza; Mahmoud I Elbadry; Kazuhisa Chonabayashi; Yoshinori Yoshida; Takamasa Katagiri; Kenichi Harada; Noriharu Nakagawa; Yoshitaka Zaimoku; Tatsuya Imi; Hiroyuki Takamatsu; Tatsuhiko Ozawa; Hiroyuki Maruyama; Hassan A Hassanein; Amal Khalifa A Noreldin; Katsuto Takenaka; Koichi Akashi; Hiroshi Hamana; Hiroyuki Kishi; Yoshiki Akatsuka; Shinji Nakao
Journal:  Blood Adv       Date:  2018-02-27

Review 8.  Single-cell fate decisions of bipotential hematopoietic progenitors.

Authors:  Marjorie Brand; Edward Morrissey
Journal:  Curr Opin Hematol       Date:  2020-07       Impact factor: 3.218

9.  Lentiviral Fluorescent Genetic Barcoding for Multiplex Fate Tracking of Leukemic Cells.

Authors:  Tobias Maetzig; Jens Ruschmann; Lea Sanchez Milde; Courteney K Lai; Niklas von Krosigk; R Keith Humphries
Journal:  Mol Ther Methods Clin Dev       Date:  2017-06-01       Impact factor: 6.698

10.  DNA methylation disruption reshapes the hematopoietic differentiation landscape.

Authors:  Franco Izzo; Stanley C Lee; Asaf Poran; Ronan Chaligne; Federico Gaiti; Baptiste Gross; Rekha R Murali; Sunil D Deochand; Chelston Ang; Philippa Wyndham Jones; Anna S Nam; Kyu-Tae Kim; Steven Kothen-Hill; Rafael C Schulman; Michelle Ki; Priscillia Lhoumaud; Jane A Skok; Aaron D Viny; Ross L Levine; Ephraim Kenigsberg; Omar Abdel-Wahab; Dan A Landau
Journal:  Nat Genet       Date:  2020-03-23       Impact factor: 38.330
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