Literature DB >> 28226291

Cell-free synthetic biology for environmental sensing and remediation.

David K Karig1.   

Abstract

The fields of biosensing and bioremediation leverage the phenomenal array of sensing and metabolic capabilities offered by natural microbes. Synthetic biology provides tools for transforming these fields through complex integration of natural and novel biological components to achieve sophisticated sensing, regulation, and metabolic function. However, the majority of synthetic biology efforts are conducted in living cells, and concerns over releasing genetically modified organisms constitute a key barrier to environmental applications. Cell-free protein expression systems offer a path towards leveraging synthetic biology, while preventing the spread of engineered organisms in nature. Recent efforts in the areas of cell-free approaches for sensing, regulation, and metabolic pathway implementation, as well as for preserving and deploying cell-free expression components, embody key steps towards realizing the potential of cell-free systems for environmental sensing and remediation.
Copyright © 2017 The Author. Published by Elsevier Ltd.. All rights reserved.

Mesh:

Year:  2017        PMID: 28226291     DOI: 10.1016/j.copbio.2017.01.010

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  13 in total

1.  Preservation of protein expression systems at elevated temperatures for portable therapeutic production.

Authors:  David K Karig; Seneca Bessling; Peter Thielen; Sherry Zhang; Joshua Wolfe
Journal:  J R Soc Interface       Date:  2017-04       Impact factor: 4.118

Review 2.  Blueprints for Biosensors: Design, Limitations, and Applications.

Authors:  Alexander C Carpenter; Ian T Paulsen; Thomas C Williams
Journal:  Genes (Basel)       Date:  2018-07-26       Impact factor: 4.096

Review 3.  Translating New Synthetic Biology Advances for Biosensing Into the Earth and Environmental Sciences.

Authors:  Ilenne Del Valle; Emily M Fulk; Prashant Kalvapalle; Jonathan J Silberg; Caroline A Masiello; Lauren B Stadler
Journal:  Front Microbiol       Date:  2021-02-04       Impact factor: 5.640

4.  The ChpR transcriptional regulator of Sinorhizobium meliloti senses 3,5,6-trichloropyridinol, a degradation product of the organophosphate pesticide chlorpyrifos.

Authors:  Nathan D McDonald; Courtney E Love; Henry S Gibbons
Journal:  Access Microbiol       Date:  2021-12-15

Review 5.  Bacterial cell-free expression technology to in vitro systems engineering and optimization.

Authors:  Filippo Caschera
Journal:  Synth Syst Biotechnol       Date:  2017-08-07

6.  Functionalizing cell-mimetic giant vesicles with encapsulated bacterial biosensors.

Authors:  Tatiana Trantidou; Linda Dekker; Karen Polizzi; Oscar Ces; Yuval Elani
Journal:  Interface Focus       Date:  2018-08-17       Impact factor: 3.906

7.  Methods to reduce variability in E. Coli-based cell-free protein expression experiments.

Authors:  Jared L Dopp; Yeong Ran Jo; Nigel F Reuel
Journal:  Synth Syst Biotechnol       Date:  2019-11-08

8.  Streamlining the preparation of "endotoxin-free" ClearColi cell extract with autoinduction media for cell-free protein synthesis of the therapeutic protein crisantaspase.

Authors:  J Porter Hunt; Emily Long Zhao; Mehran Soltani; Madison Frei; J Andrew D Nelson; Bradley C Bundy
Journal:  Synth Syst Biotechnol       Date:  2019-12-13

Review 9.  Emerging biosensors in detection of natural products.

Authors:  Firoozeh Piroozmand; Fatemeh Mohammadipanah; Farnoush Faridbod
Journal:  Synth Syst Biotechnol       Date:  2020-09-04

Review 10.  Biotechnology Applications of Cell-Free Expression Systems.

Authors:  August Brookwell; Javin P Oza; Filippo Caschera
Journal:  Life (Basel)       Date:  2021-12-08
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