Literature DB >> 28226213

Oscillatory Reaction Induced Periodic C-Quadruplex DNA Gating of Artificial Ion Channels.

Jian Wang1, Ruochen Fang2, Jue Hou3, Huacheng Zhang3, Ye Tian4, Huanting Wang3, Lei Jiang1,3.   

Abstract

Many biological ion channels controlled by biochemical reactions have autonomous and periodic gating functions, which play important roles in continuous mass transport and signal transmission in living systems. Inspired by these functional biological ion channel systems, here we report an artificial self-oscillating nanochannel system that can autonomously and periodically control its gating process under constant conditions. The system is constructed by integrating a chemical oscillator, consisting of BrO3-, Fe(CN)64-, H+, and SO32-, into a synthetic proton-sensitive nanochannel modified with C-quadruplex (C4) DNA motors. The chemical oscillator, containing H+-producing and H+-consuming reactions, can cyclically drive conformational changes of the C4-DNA motors on the channel wall between random coil and folded i-motif structures, thus leading to autonomous gating of the nanochannel between open and closed states. The autonomous gating processes are confirmed by periodic high-low ionic current oscillations of the channel monitored under constant reaction conditions. The utilization of a chemical oscillator integrated with DNA molecules represents a method to directly convert chemical energy of oscillating reactions to kinetic energy of conformational changes of the artificial nanochannels and even to achieve diverse autonomous gating functions in artificial nanofluidic devices.

Entities:  

Keywords:  C-quadruplex DNA; artificial nanochannel; conformational changes; gating; self-oscillating

Mesh:

Substances:

Year:  2017        PMID: 28226213     DOI: 10.1021/acsnano.6b08727

Source DB:  PubMed          Journal:  ACS Nano        ISSN: 1936-0851            Impact factor:   15.881


  3 in total

1.  Non-lithographic nanofluidic channels with precisely controlled circular cross sections.

Authors:  Yang-Seok Park; Jung Min Oh; Yoon-Kyoung Cho
Journal:  RSC Adv       Date:  2018-05-29       Impact factor: 4.036

2.  Label-free single-molecule identification of telomere G-quadruplexes with a solid-state nanopore sensor.

Authors:  Sen Wang; Liyuan Liang; Jing Tang; Yao Cai; Chuanqi Zhao; Shaoxi Fang; Huabin Wang; Ting Weng; Liang Wang; Deqiang Wang
Journal:  RSC Adv       Date:  2020-07-21       Impact factor: 4.036

3.  Ultrafast selective transport of alkali metal ions in metal organic frameworks with subnanometer pores.

Authors:  Huacheng Zhang; Jue Hou; Yaoxin Hu; Peiyao Wang; Ranwen Ou; Lei Jiang; Jefferson Zhe Liu; Benny D Freeman; Anita J Hill; Huanting Wang
Journal:  Sci Adv       Date:  2018-02-09       Impact factor: 14.136

  3 in total

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