Literature DB >> 28220356

Overexpression of LINE-1 Retrotransposons in Autism Brain.

Svitlana Shpyleva1, Stepan Melnyk1, Oleksandra Pavliv1, Igor Pogribny2, S Jill James3.   

Abstract

Long interspersed nuclear elements-1 (LINE-1 or L1) are mobile DNA sequences that are capable of duplication and insertion (retrotransposition) within the genome. Recently, retrotransposition of L1 was shown to occur within human brain leading to somatic mosaicism in hippocampus and cerebellum. Because unregulated L1 activity can promote genomic instability and mutagenesis, multiple mechanisms including epigenetic chromatin condensation have evolved to effectively repress L1 expression. Nonetheless, L1 expression has been shown to be increased in patients with Rett syndrome and schizophrenia. Based on this evidence and our reports of oxidative stress and epigenetic dysregulation in autism cerebellum, we sought to determine whether L1 expression was increased in autism brain. The results indicated that L1 expression was significantly elevated in the autism cerebellum but not in BA9, BA22, or BA24. The binding of repressive MeCP2 and histone H3K9me3 to L1 sequences was significantly lower in autism cerebellum suggesting that relaxation of epigenetic repression may have contributed to increased expression. Further, the increase in L1 expression was inversely correlated with glutathione redox status consistent with reports indicating that L1 expression is increased under pro-oxidant conditions. Finally, the expression of transcription factor FOXO3, sensor of oxidative stress, was significantly increased and positively associated with L1 expression and negatively associated with glutathione redox status. While these novel results are an important first step, future understanding of the contribution of elevated L1 expression to neuronal CNVs and genomic instability in autism will depend on emerging cell-specific genomic technologies, a challenge that warrants future investigation.

Entities:  

Keywords:  Autism; Brain; Epigenetics, FOXO3; Line-1; Redox

Mesh:

Substances:

Year:  2017        PMID: 28220356     DOI: 10.1007/s12035-017-0421-x

Source DB:  PubMed          Journal:  Mol Neurobiol        ISSN: 0893-7648            Impact factor:   5.590


  42 in total

1.  Gene coexpression networks in human brain identify epigenetic modifications in alcohol dependence.

Authors:  Igor Ponomarev; Shi Wang; Lingling Zhang; R Adron Harris; R Dayne Mayfield
Journal:  J Neurosci       Date:  2012-02-01       Impact factor: 6.167

2.  Somatic mosaicism in neuronal precursor cells mediated by L1 retrotransposition.

Authors:  Alysson R Muotri; Vi T Chu; Maria C N Marchetto; Wei Deng; John V Moran; Fred H Gage
Journal:  Nature       Date:  2005-06-16       Impact factor: 49.962

Review 3.  Retrotransposons as regulators of gene expression.

Authors:  Reyad A Elbarbary; Bronwyn A Lucas; Lynne E Maquat
Journal:  Science       Date:  2016-02-11       Impact factor: 47.728

4.  LINE-1 hypomethylation induced by reactive oxygen species is mediated via depletion of S-adenosylmethionine.

Authors:  Chiraphat Kloypan; Monpicha Srisa-art; Apiwat Mutirangura; Chanchai Boonla
Journal:  Cell Biochem Funct       Date:  2015-07-15       Impact factor: 3.685

5.  Human L1 retrotransposon encodes a conserved endonuclease required for retrotransposition.

Authors:  Q Feng; J V Moran; H H Kazazian; J D Boeke
Journal:  Cell       Date:  1996-11-29       Impact factor: 41.582

6.  Forkhead transcription factor FOXO3a protects quiescent cells from oxidative stress.

Authors:  Geert J P L Kops; Tobias B Dansen; Paulien E Polderman; Ingrid Saarloos; Karel W A Wirtz; Paul J Coffer; Ting-T Huang; Johannes L Bos; René H Medema; Boudewijn M T Burgering
Journal:  Nature       Date:  2002-09-19       Impact factor: 49.962

Review 7.  Multiple LINEs of retrotransposon silencing mechanisms in the mammalian germline.

Authors:  Fang Yang; P Jeremy Wang
Journal:  Semin Cell Dev Biol       Date:  2016-03-05       Impact factor: 7.727

8.  Evidence of oxidative damage and inflammation associated with low glutathione redox status in the autism brain.

Authors:  S Rose; S Melnyk; O Pavliv; S Bai; T G Nick; R E Frye; S J James
Journal:  Transl Psychiatry       Date:  2012-07-10       Impact factor: 6.222

9.  De novo CNV analysis implicates specific abnormalities of postsynaptic signalling complexes in the pathogenesis of schizophrenia.

Authors:  G Kirov; A J Pocklington; P Holmans; D Ivanov; M Ikeda; D Ruderfer; J Moran; K Chambert; D Toncheva; L Georgieva; D Grozeva; M Fjodorova; R Wollerton; E Rees; I Nikolov; L N van de Lagemaat; A Bayés; E Fernandez; P I Olason; Y Böttcher; N H Komiyama; M O Collins; J Choudhary; K Stefansson; H Stefansson; S G N Grant; S Purcell; P Sklar; M C O'Donovan; M J Owen
Journal:  Mol Psychiatry       Date:  2011-11-15       Impact factor: 15.992

10.  L1 retrotransposition in neurons is modulated by MeCP2.

Authors:  Alysson R Muotri; Maria C N Marchetto; Nicole G Coufal; Ruth Oefner; Gene Yeo; Kinichi Nakashima; Fred H Gage
Journal:  Nature       Date:  2010-11-18       Impact factor: 49.962

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  28 in total

Review 1.  LINE-1 retrotransposons in healthy and diseased human brain.

Authors:  Nicole A Suarez; Angela Macia; Alysson R Muotri
Journal:  Dev Neurobiol       Date:  2017-12-29       Impact factor: 3.964

Review 2.  Melatonin: Regulation of Viral Phase Separation and Epitranscriptomics in Post-Acute Sequelae of COVID-19.

Authors:  Doris Loh; Russel J Reiter
Journal:  Int J Mol Sci       Date:  2022-07-23       Impact factor: 6.208

Review 3.  The Role of Transposable Elements of the Human Genome in Neuronal Function and Pathology.

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4.  A retrotransposon storm marks clinical phenoconversion to late-onset Alzheimer's disease.

Authors:  Fabio Macciardi; Maria Giulia Bacalini; Ricardo Miramontes; Alessio Boattini; Cristian Taccioli; Giorgia Modenini; Rond Malhas; Laura Anderlucci; Yuriy Gusev; Thomas J Gross; Robert M Padilla; Massimo S Fiandaca; Elizabeth Head; Guia Guffanti; Howard J Federoff; Mark Mapstone
Journal:  Geroscience       Date:  2022-05-19       Impact factor: 7.581

5.  Meta-Analysis Suggests That Intron Retention Can Affect Quantification of Transposable Elements from RNA-Seq Data.

Authors:  Nicolò Gualandi; Cristian Iperi; Mauro Esposito; Federico Ansaloni; Stefano Gustincich; Remo Sanges
Journal:  Biology (Basel)       Date:  2022-05-27

Review 6.  Somatic mosaicism in the diseased brain.

Authors:  Ivan Y Iourov; Svetlana G Vorsanova; Oxana S Kurinnaia; Sergei I Kutsev; Yuri B Yurov
Journal:  Mol Cytogenet       Date:  2022-10-21       Impact factor: 1.904

7.  Complex epigenetic patterns in cerebellum generated after developmental exposure to trichloroethylene and/or high fat diet in autoimmune-prone mice.

Authors:  Sarah J Blossom; Stepan B Melnyk; Frank A Simmen
Journal:  Environ Sci Process Impacts       Date:  2020-01-02       Impact factor: 4.238

Review 8.  Pivotal Impacts of Retrotransposon Based Invasive RNAs on Evolution.

Authors:  Laleh Habibi; Hamzeh Salmani
Journal:  Front Microbiol       Date:  2017-10-10       Impact factor: 5.640

Review 9.  Warning SINEs: Alu elements, evolution of the human brain, and the spectrum of neurological disease.

Authors:  Peter A Larsen; Kelsie E Hunnicutt; Roxanne J Larsen; Anne D Yoder; Ann M Saunders
Journal:  Chromosome Res       Date:  2018-02-19       Impact factor: 5.239

10.  Detection of the LINE-1 retrotransposon RNA-binding protein ORF1p in different anatomical regions of the human brain.

Authors:  Raj Kishor Kustwar; Savita Budania; Debpali Sur; Anita Mahadevan; Dustin C Hancks; Vijay Yadav; S K Shankar; Prabhat K Mandal
Journal:  Mob DNA       Date:  2017-11-22
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