Literature DB >> 28217714

DR HAGIS-a fundus image database for the automatic extraction of retinal surface vessels from diabetic patients.

Sven Holm1, Greg Russell1, Vincent Nourrit2, Niall McLoughlin1.   

Abstract

A database of retinal fundus images, the DR HAGIS database, is presented. This database consists of 39 high-resolution color fundus images obtained from a diabetic retinopathy screening program in the UK. The NHS screening program uses service providers that employ different fundus and digital cameras. This results in a range of different image sizes and resolutions. Furthermore, patients enrolled in such programs often display other comorbidities in addition to diabetes. Therefore, in an effort to replicate the normal range of images examined by grading experts during screening, the DR HAGIS database consists of images of varying image sizes and resolutions and four comorbidity subgroups: collectively defined as the diabetic retinopathy, hypertension, age-related macular degeneration, and Glaucoma image set (DR HAGIS). For each image, the vasculature has been manually segmented to provide a realistic set of images on which to test automatic vessel extraction algorithms. Modified versions of two previously published vessel extraction algorithms were applied to this database to provide some baseline measurements. A method based purely on the intensity of images pixels resulted in a mean segmentation accuracy of 95.83% ([Formula: see text]), whereas an algorithm based on Gabor filters generated an accuracy of 95.71% ([Formula: see text]).

Entities:  

Keywords:  diabetes; fundus image database; image processing; retina; vessel extraction; vessel segmentation

Year:  2017        PMID: 28217714      PMCID: PMC5299858          DOI: 10.1117/1.JMI.4.1.014503

Source DB:  PubMed          Journal:  J Med Imaging (Bellingham)        ISSN: 2329-4302


  26 in total

1.  Locating blood vessels in retinal images by piecewise threshold probing of a matched filter response.

Authors:  A Hoover; V Kouznetsova; M Goldbaum
Journal:  IEEE Trans Med Imaging       Date:  2000-03       Impact factor: 10.048

2.  Ridge-based vessel segmentation in color images of the retina.

Authors:  Joes Staal; Michael D Abràmoff; Meindert Niemeijer; Max A Viergever; Bram van Ginneken
Journal:  IEEE Trans Med Imaging       Date:  2004-04       Impact factor: 10.048

3.  A new supervised method for blood vessel segmentation in retinal images by using gray-level and moment invariants-based features.

Authors:  Diego Marin; Arturo Aquino; Manuel Emilio Gegundez-Arias; José Manuel Bravo
Journal:  IEEE Trans Med Imaging       Date:  2010-08-09       Impact factor: 10.048

4.  Detection of blood vessels in fundus images of the retina using Gabor wavelets.

Authors:  Faraz Oloumi; Rangaraj M Rangayyan; Foad Oloumi; Peyman Eshghzadeh-Zanjani; Fabio J Ayres
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2007

5.  REVIEW - a reference data set for retinal vessel profiles.

Authors:  Bashir Al-Diri; Andrew Hunter; David Steel; Maged Habib; Taghread Hudaib; Simon Berry
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2008

6.  The oxygen saturation in retinal vessels from diabetic patients depends on the severity and type of vision-threatening retinopathy.

Authors:  Christina M Jørgensen; Sveinn H Hardarson; Toke Bek
Journal:  Acta Ophthalmol       Date:  2013-12-16       Impact factor: 3.761

7.  Global burden of diabetes, 1995-2025: prevalence, numerical estimates, and projections.

Authors:  H King; R E Aubert; W H Herman
Journal:  Diabetes Care       Date:  1998-09       Impact factor: 19.112

8.  A novel method for blood vessel detection from retinal images.

Authors:  Lili Xu; Shuqian Luo
Journal:  Biomed Eng Online       Date:  2010-02-28       Impact factor: 2.819

9.  Retinopathy online challenge: automatic detection of microaneurysms in digital color fundus photographs.

Authors:  Meindert Niemeijer; Bram van Ginneken; Michael J Cree; Atsushi Mizutani; Gwénolé Quellec; Clara I Sanchez; Bob Zhang; Roberto Hornero; Mathieu Lamard; Chisako Muramatsu; Xiangqian Wu; Guy Cazuguel; Jane You; Agustín Mayo; Qin Li; Yuji Hatanaka; Béatrice Cochener; Christian Roux; Fakhri Karray; María Garcia; Hiroshi Fujita; Michael D Abramoff
Journal:  IEEE Trans Med Imaging       Date:  2009-10-09       Impact factor: 10.048

10.  Changes in retinal vessel diameter and incidence and progression of diabetic retinopathy.

Authors:  Ronald Klein; Chelsea E Myers; Kristine E Lee; Ronald Gangnon; Barbara E K Klein
Journal:  Arch Ophthalmol       Date:  2012-06
View more
  6 in total

1.  Improving foveal avascular zone segmentation in fluorescein angiograms by leveraging manual vessel labels from public color fundus pictures.

Authors:  Dominik Hofer; Ursula Schmidt-Erfurth; José Ignacio Orlando; Felix Goldbach; Bianca S Gerendas; Philipp Seeböck
Journal:  Biomed Opt Express       Date:  2022-04-04       Impact factor: 3.562

2.  Retinal Glaucoma Public Datasets: What Do We Have and What Is Missing?

Authors:  José Camara; Roberto Rezende; Ivan Miguel Pires; António Cunha
Journal:  J Clin Med       Date:  2022-07-02       Impact factor: 4.964

3.  The RETA Benchmark for Retinal Vascular Tree Analysis.

Authors:  Xingzheng Lyu; Li Cheng; Sanyuan Zhang
Journal:  Sci Data       Date:  2022-07-11       Impact factor: 8.501

4.  A Deep Learning System for Fully Automated Retinal Vessel Measurement in High Throughput Image Analysis.

Authors:  Danli Shi; Zhihong Lin; Wei Wang; Zachary Tan; Xianwen Shang; Xueli Zhang; Wei Meng; Zongyuan Ge; Mingguang He
Journal:  Front Cardiovasc Med       Date:  2022-03-22

5.  State-of-the-art retinal vessel segmentation with minimalistic models.

Authors:  Adrian Galdran; André Anjos; José Dolz; Hadi Chakor; Hervé Lombaert; Ismail Ben Ayed
Journal:  Sci Rep       Date:  2022-04-13       Impact factor: 4.379

6.  AutoMorph: Automated Retinal Vascular Morphology Quantification Via a Deep Learning Pipeline.

Authors:  Yukun Zhou; Siegfried K Wagner; Mark A Chia; An Zhao; Peter Woodward-Court; Moucheng Xu; Robbert Struyven; Daniel C Alexander; Pearse A Keane
Journal:  Transl Vis Sci Technol       Date:  2022-07-08       Impact factor: 3.048

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.