Literature DB >> 28217357

Crystal structure of poly[tetra-μ2-cyanido-1:2κ8N:C-bis-(dimethyl sulfoxide-1κO)diargentate(I)iron(II)].

Olesia I Kucheriv1, Dina D Naumova1, Inna I Tokmenko2, Ruslan A Polunin3, Kateryna V Terebilenko1.   

Abstract

In the title polymeric complex, [Fe{OS(CH3)2}2{Ag(CN)2}2], the FeII cation is located at an inversion centre and is coordinated by four cyanide (CN-) anions and two dimethyl sulfoxide mol-ecules in a slightly compressed N4O2 octa-hedral geometry, the AgI cation is C-coordinated by two CN- anions in a nearly linear geometry. The CN- anions bridge the FeII and AgI cations to form a two-dimensional polymeric structure extending parallel to (102). In the crystal, the nearest Ag⋯Ag distance between polymeric sheets is 3.8122 (12) Å. The crystal studied was a twin with a contribution of 0.2108 (12) for the minor component.

Entities:  

Keywords:  FeII complex; Hofmann clathrate analogue; crystal structure; di­cyanido­argentate; metal–organic framework

Year:  2017        PMID: 28217357      PMCID: PMC5290580          DOI: 10.1107/S2056989017001049

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Chemical context

Metal–organic frameworks (MOFs), also known as porous coordination polymers, form a group of compounds that consist of metal ions and organic ligand linkers (Zhou & Kitagawa, 2014 ▸). MOFs have attracted considerable attention over the past decades due to the ability to tune their porosity, structure and other properties by a rational choice of the metal and linkers. Despite the fact that the most investigated properties of MOFs are gas storage and separation, it has been shown that the incorporation of corresponding building blocks or guests into MOFs can provoke specific functional magnetic, chiral, catalytic, conductive, luminescence and other properties. Hofmann clathrate analogues represent a huge group of MOFs. The first prototype clathrate of this family was [Ni(NH3)2{Ni(CN)4}] reported by Hofmann & Küspert (1897 ▸), however its structure was only obtained by Powell & Rayner (1949 ▸). The structure analysis showed that the coordination framework of this complex is supported by bridging square-planar tetracyanidonickelate ligands, and the octahedral coordination sphere of NiII is completed by two NH3 mol­ecules. The layers in this clathrate are separated by ∼8 Å, which leads to the formation of guest-accessible cavities. This has allowed a series of clathrates to obtained with different aromatic guests such as benzene, phenol, aniline, pyridine, thio­phene and pyrrole. Later, the group of Hofmann clathrate analogues was expanded to [M(L)2{M′(CN)4}] where M = Fe2+, Co2+, Ni2+, Cu2+, Zn2+, Cd2+ and Mn2+, M′ = Ni2+, Pd2+, Pt2+ and L is either a unidentate or bridging ligand to form two- or three-dimensional coordination frameworks, respectively. More importantly, due to the rational choice of ligand, Kitazawa et al. (1996 ▸) succeeded in obtaining the first Hofmann-type complex [Fe(py)2{Ni(CN)4}] that exhibited spin-crossover behavior. This phenomenon is a spectacular ability of some 3d metals to exist in two different spin states. This discovery has led to multiple attempts to modify this compound in order to obtain other spin-crossover materials. The main synthetic approaches are: (a) the change of the pyridine ligand to other unidentate or bridging ligands; (b) the induction of various guest mol­ecules that influence spin-crossover characteristics; (c) use of different square-planar {[M(CN)4]2−, M = Ni2+, Pt2+, Pd2+; Kucheriv et al., 2016 ▸}, dodeca­hedral {[Nb(CN)8]4−; Ohkoshi et al., 2013 ▸} or linear {[M(CN)2]−, M = Ag+, Au+; Gural’skiy et al., 2016b ▸} linkers. Here we offer a new Hofmann-like coordination compound with general formula [Fe(dmso)2{Ag(CN)2}2] in which the FeII atoms are stabilized in a high-spin state.

Structural commentary

The crystal structure of the title compound was determined from 243 K data. The FeII cation is located at an inversion centre and coordinated by four CN− anions and two di­methyl­sulfoxide mol­ecules in a slightly compressed N4O2 octa­hedral environment (Fig. 1 ▸). The AgI cation is C-coord­inated by two CN− anions in a nearly linear mode [C1—Ag—C2 = 173.0 (3)°]. The CN− anions bridge the FeII and AgI cations to form a two-dimensional polymeric structure. In the structure, the equatorial FeN bonds [2.166 (4) and 2.176 (4) Å] have the typical value for FeII in a high-spin state. The axial positions of the FeII cation are occupied by two di­methyl­sulfoxide mol­ecules with an Fe—O bond length of 2.096 (4) Å. The S=O bond length of 1.532 (4) Å is increased by 0.03 Å with respect to non-coord­inating dmso; the average S—C bond of 1.774 (6) Å is shorter than in those in non-coordinating di­methyl­sulfoxide. This is a typical value for O-bonded di­methyl­sulfoxide complexes (Calligaris, 2004 ▸). The torsion angles around the Fe—O bond are Fe1—O1—S1—C3 = 96.3 (3)° and Fe1—O1—S1—C4 = −159.2 (3)°. The polyhedral distortion which is described by the deviation from an octa­hedral geometry is ΣFe|90 − Θ| = 9.86 (16)° where Θ is the NFeN or O—FeN angle in the coordination environment of the metal; however, this value is slightly lower than expected for a high-spin FeII complex.
Figure 1

coordination environments of the FeII and AgI atoms in the structure of the title compound, showing the atom-labelling scheme, with displacement ellipsoids are drawn at the 50% probability level. [Symmetry codes: (i) 2 − x, 1 − y, 1 − z; (ii) 1 + x,  − y,  + z; (iii) 1 − x, − + y,  − z.]

Supra­molecular features

The coordination framework is connected by bridging di­cyanido­argentate moieties into a two-dimensional grid that propagates along the (102) plane (Fig. 2 ▸ a). The short inter­layer Ag⋯Ag distance of 3.8122 (12) Å indicates argentophilic inter­actions that propagate along the c-axis direction. A similar type of inter­molecular bonding between seemingly closed-shell metal atoms has previously been reported for many Ag- and Au-containing Hofmann-type structures, e.g. Au⋯Au distances of 3.3792 (3) Å were found between the [Fe{Au(CN)2}−] planes (Gural’skiy et al., 2016a ▸). In addition, in the title compound the FeNC and Ag—CN linkages show a slight deviation from linearity (9.5 and 6° on average, respectively) that leads to a slight corrugation of [Fe{Ag(CN)2}−] layers (Fig. 2 ▸ b).
Figure 2

(a) View of the crystal structure of the title compound in the ab plane. H atoms have been omitted for clarity. (b) View of the crystal structure showing the two-dimensional layers. Colour key: brown Fe, green Ag, yellow S, blue N, grey C and red O.

Database survey

The title compound has never been obtained before. A database survey reveals numerous Fe–Ag CN-bridged frameworks supported by various co-ligands axially bound to the iron atoms.

Synthesis and crystallization

Crystals of the title compound were obtained by the slow-diffusion method within three layers in 10 ml tubes: the first layer was a solution of Fe(ClO4)2 (0.1 mmol, 26 mg) in di­methyl­sulfoxide (2 ml); second one was a di­methyl­sulfoxide–ethanol mixture (1:1, 5 ml); the third was a solution of K[Ag(CN)2] (0.1 mmol, 20 mg) in an ethanolwater mixture (9:1 ratio v/v, 2 ml). After two weeks, orange crystals grew in the second layer; they were collected and kept under the mother solution prior to the measurements.

Refinement

Crystal data, data collection and structure refinement details are summarized in Table 1 ▸. All H atoms of methyl groups were placed geometrically at their expected calculated positions with C—H = 0.97 Å and U iso(H) = 1.5U eq(C). The idealized CH3 group was fixed using an AFIX 137 command that allowed the H atoms to ride on C atom and rotate around S—C bond. Twining of two components was considered with the transformation matrix ( 0 0 0 0 0 1) and a twin contribution of BASF = 0.2108 (12).
Table 1

Experimental details

Crystal data
Chemical formula[Ag2Fe(CN)4(C2H6OS)2]
M r 531.93
Crystal system, space groupMonoclinic, P21/c
Temperature (K)243
a, b, c (Å)8.4125 (16), 14.492 (3), 7.4679 (14)
β (°)116.053 (4)
V3)817.9 (3)
Z 2
Radiation typeMo Kα
μ (mm−1)3.50
Crystal size (mm)0.15 × 0.1 × 0.05
 
Data collection
DiffractometerBruker SMART
Absorption correctionMulti-scan (SADABS; Bruker, 2013)
T min, T max 0.625, 0.746
No. of measured, independent and observed [I > 2σ(I)] reflections16468, 1970, 1726
R int 0.045
(sin θ/λ)max−1)0.661
 
Refinement
R[F 2 > 2σ(F 2)], wR(F 2), S 0.031, 0.071, 1.16
No. of reflections1970
No. of parameters91
H-atom treatmentH-atom parameters constrained
Δρmax, Δρmin (e Å−3)0.42, −1.05

Computer programs: SMART and SAINT (Bruker, 2013 ▸), SHELXS97 (Sheldrick, 2008 ▸), SHELXL2014 (Sheldrick, 2015 ▸), DIAMOND (Brandenburg et al., 1999 ▸) and publCIF (Westrip, 2010 ▸).

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S2056989017001049/xu5899sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989017001049/xu5899Isup2.hkl CCDC reference: 1528660 Additional supporting information: crystallographic information; 3D view; checkCIF report
[Ag2Fe(CN)4(C2H6OS)2]F(000) = 512
Mr = 531.93Dx = 2.160 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 8.4125 (16) ÅCell parameters from 4840 reflections
b = 14.492 (3) Åθ = 2.7–26.2°
c = 7.4679 (14) ŵ = 3.50 mm1
β = 116.053 (4)°T = 243 K
V = 817.9 (3) Å3Plate, orange
Z = 20.15 × 0.1 × 0.05 mm
Bruker SMART diffractometer1726 reflections with I > 2σ(I)
φ and ω scansRint = 0.045
Absorption correction: multi-scan (SADABS; Bruker, 2013)θmax = 28.0°, θmin = 1.4°
Tmin = 0.625, Tmax = 0.746h = −11→11
16468 measured reflectionsk = −19→19
1970 independent reflectionsl = −8→9
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.031H-atom parameters constrained
wR(F2) = 0.071w = 1/[σ2(Fo2) + (0.0068P)2 + 2.779P] where P = (Fo2 + 2Fc2)/3
S = 1.16(Δ/σ)max = 0.001
1970 reflectionsΔρmax = 0.42 e Å3
91 parametersΔρmin = −1.05 e Å3
0 restraints
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/Ueq
Ag10.45426 (6)0.72349 (3)0.33300 (9)0.05178 (15)
Fe11.00000.50000.50000.0255 (2)
S11.17380 (18)0.39095 (9)0.9253 (2)0.0377 (3)
C31.3090 (7)0.4721 (4)1.1049 (9)0.0494 (16)
H3A1.35670.51581.04270.074*
H3B1.40540.44021.21190.074*
H3C1.23890.50491.15860.074*
C41.0778 (8)0.3340 (4)1.0651 (9)0.0478 (15)
H4A1.01940.37891.11210.072*
H4B1.16970.30291.17820.072*
H4C0.99200.28900.98110.072*
O11.0225 (5)0.4471 (3)0.7713 (5)0.0376 (8)
N10.7675 (5)0.5774 (3)0.4638 (7)0.0349 (10)
C10.6498 (6)0.6262 (4)0.4204 (9)0.0404 (12)
N20.1741 (5)0.8859 (3)0.1555 (7)0.0391 (11)
C20.2720 (7)0.8283 (4)0.2252 (10)0.0419 (13)
U11U22U33U12U13U23
Ag10.03045 (19)0.0337 (2)0.0765 (3)0.01486 (16)0.0099 (2)0.0063 (2)
Fe10.0182 (4)0.0186 (4)0.0328 (5)0.0011 (3)0.0048 (4)0.0001 (4)
S10.0387 (7)0.0344 (6)0.0375 (7)0.0129 (5)0.0146 (6)0.0053 (5)
C30.029 (3)0.057 (4)0.053 (4)−0.006 (2)0.010 (3)0.008 (3)
C40.057 (4)0.035 (3)0.045 (3)−0.007 (3)0.017 (3)0.002 (3)
O10.0322 (18)0.041 (2)0.034 (2)0.0086 (16)0.0097 (16)0.0076 (17)
N10.0260 (19)0.033 (2)0.039 (3)0.0043 (16)0.0084 (18)−0.0005 (19)
C10.028 (2)0.035 (3)0.051 (3)0.006 (2)0.011 (2)0.001 (3)
N20.025 (2)0.027 (2)0.054 (3)0.0036 (17)0.007 (2)0.001 (2)
C20.028 (2)0.031 (3)0.057 (4)0.003 (2)0.009 (3)0.000 (3)
Ag1—C12.044 (5)S1—O11.523 (4)
Ag1—C22.054 (5)C3—H3A0.9700
Fe1—O1i2.096 (4)C3—H3B0.9700
Fe1—O12.096 (4)C3—H3C0.9700
Fe1—N12.166 (4)C4—H4A0.9700
Fe1—N1i2.166 (4)C4—H4B0.9700
Fe1—N2ii2.176 (4)C4—H4C0.9700
Fe1—N2iii2.176 (4)N1—C11.142 (6)
S1—C31.771 (6)N2—Fe1iv2.176 (4)
S1—C41.778 (6)N2—C21.127 (6)
C1—Ag1—C2173.0 (3)O1—S1—C4104.3 (3)
O1i—Fe1—O1180.0S1—C3—H3A109.5
O1—Fe1—N1i89.82 (16)S1—C3—H3B109.5
O1—Fe1—N190.18 (16)S1—C3—H3C109.5
O1i—Fe1—N189.82 (16)H3A—C3—H3B109.5
O1i—Fe1—N1i90.18 (16)H3A—C3—H3C109.5
O1i—Fe1—N2ii89.54 (17)H3B—C3—H3C109.5
O1—Fe1—N2iii89.54 (17)S1—C4—H4A109.5
O1i—Fe1—N2iii90.46 (17)S1—C4—H4B109.5
O1—Fe1—N2ii90.46 (17)S1—C4—H4C109.5
N1—Fe1—N1i180.0H4A—C4—H4B109.5
N1i—Fe1—N2iii91.82 (16)H4A—C4—H4C109.5
N1i—Fe1—N2ii88.18 (16)H4B—C4—H4C109.5
N1—Fe1—N2ii91.83 (16)S1—O1—Fe1128.0 (2)
N1—Fe1—N2iii88.17 (16)C1—N1—Fe1168.3 (5)
N2ii—Fe1—N2iii180.0N1—C1—Ag1173.7 (5)
C3—S1—C499.8 (3)C2—N2—Fe1iv173.6 (5)
O1—S1—C3105.2 (3)N2—C2—Ag1175.5 (6)
C3—S1—O1—Fe196.3 (3)C4—S1—O1—Fe1−159.2 (3)
  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Metal-organic frameworks (MOFs).

Authors:  Hong-Cai Joe Zhou; Susumu Kitagawa
Journal:  Chem Soc Rev       Date:  2014-08-21       Impact factor: 54.564

3.  Spin Crossover in Fe(II)-M(II) Cyanoheterobimetallic Frameworks (M = Ni, Pd, Pt) with 2-Substituted Pyrazines.

Authors:  Olesia I Kucheriv; Sergii I Shylin; Vadim Ksenofontov; Sebastian Dechert; Matti Haukka; Igor O Fritsky; Il'ya A Gural'skiy
Journal:  Inorg Chem       Date:  2016-04-27       Impact factor: 5.165

4.  Crystal structure refinement with SHELXL.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr C Struct Chem       Date:  2015-01-01       Impact factor: 1.172

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.