Literature DB >> 28211334

Adsorption capacity of multiple DNA sources to clay minerals and environmental soil matrices less than previously estimated.

Courtney M Gardner1, Claudia K Gunsch2.   

Abstract

The cultivation and consumption of transgenic crops continues to be a widely debated topic, as the potential ecological impacts are not fully understood. In particular, because antibiotic resistance genes (ARGs) have historically been used as selectable markers in the genetic engineering of transgenic crops, it is important to determine if the genetic constructs found in decomposing transgenic crops persist long enough in the environment and if they can be transferred horizontally to indigenous microorganisms. In the present study, we address the question of persistence. Others have also estimated the DNA adsorption capacity of various clays, but have done so by manipulating the surface charge and size of particles tested which may overestimate sorption and underestimate the DNA available for horizontal transfer. In the present study, isotherms were generated using model Calf Thymus DNA and transgenic maize DNA without surface modification. Montmorillonite, kaolinite, and 3 soil mixtures with varying clay content were used in this study. The adsorption capacity of pure montmorillonite and kaolinite minerals was found to be one to two orders of magnitude less than previously estimated likely due to the distribution of clay particle sizes and heteroionic particle surface charge. However, it appears that a substantial amount of DNA is still able to adsorb onto these matrices (up to 200 mg DNA per gram of clay) suggesting the potential availability of free transgenic DNA in the environment may still be significant. Future studies should be conducted to determine the fate of these genes in agricultural soils.
Copyright © 2017 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  DNA adsorption; Genetically modified crops; Langmuir isotherm

Mesh:

Substances:

Year:  2017        PMID: 28211334     DOI: 10.1016/j.chemosphere.2017.02.030

Source DB:  PubMed          Journal:  Chemosphere        ISSN: 0045-6535            Impact factor:   7.086


  6 in total

1.  A new framework for approaching precision bioremediation of PAH contaminated soils.

Authors:  Lauren K Redfern; Courtney M Gardner; Emina Hodzic; P Lee Ferguson; Helen Hsu-Kim; Claudia K Gunsch
Journal:  J Hazard Mater       Date:  2019-07-02       Impact factor: 10.588

2.  Extracellular DNA in Environmental Samples: Occurrence, Extraction, Quantification, and Impact on Microbial Biodiversity Assessment.

Authors:  Sakcham Bairoliya; Jonas Koh Zhi Xiang; Bin Cao
Journal:  Appl Environ Microbiol       Date:  2021-11-24       Impact factor: 5.005

3.  The influence of heavy metals, polyaromatic hydrocarbons, and polychlorinated biphenyls pollution on the development of antibiotic resistance in soils.

Authors:  Andrey Vladimirovich Gorovtsov; Ivan Sergeevich Sazykin; Marina Alexandrovna Sazykina
Journal:  Environ Sci Pollut Res Int       Date:  2018-02-16       Impact factor: 4.223

4.  Preliminary evidences of the presence of extracellular DNA single stranded forms in soil.

Authors:  Shamina Imran Pathan; Paola Arfaioli; Maria Teresa Ceccherini; Judith Ascher-Jenull; Giacomo Pietramellara
Journal:  PLoS One       Date:  2020-01-07       Impact factor: 3.240

5.  Whole microbial community viability is not quantitatively reflected by propidium monoazide sequencing approach.

Authors:  Ya Wang; Yan Yan; Kelsey N Thompson; Sena Bae; Emma K Accorsi; Yancong Zhang; Jiaxian Shen; Hera Vlamakis; Erica M Hartmann; Curtis Huttenhower
Journal:  Microbiome       Date:  2021-01-21       Impact factor: 14.650

6.  Collapse of the mammoth-steppe in central Yukon as revealed by ancient environmental DNA.

Authors:  Tyler J Murchie; Alistair J Monteath; Matthew E Mahony; George S Long; Scott Cocker; Tara Sadoway; Emil Karpinski; Grant Zazula; Ross D E MacPhee; Duane Froese; Hendrik N Poinar
Journal:  Nat Commun       Date:  2021-12-08       Impact factor: 14.919

  6 in total

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