Literature DB >> 28209709

Pathogenic mutations in retinitis pigmentosa 2 predominantly result in loss of RP2 protein stability in humans and zebrafish.

Fei Liu1, Yayun Qin1, Shanshan Yu1, Dinesh C Soares2, Lifang Yang1, Jun Weng1, Chang Li1, Meng Gao1, Zhaojing Lu1, Xuebin Hu1, Xiliang Liu1, Tao Jiang1, Jing Yu Liu1, Xinhua Shu3, Zhaohui Tang1, Mugen Liu4.   

Abstract

Mutations in retinitis pigmentosa 2 (RP2) account for 10-20% of X-linked retinitis pigmentosa (RP) cases. The encoded RP2 protein is implicated in ciliary trafficking of myristoylated and prenylated proteins in photoreceptor cells. To date >70 mutations in RP2 have been identified. How these mutations disrupt the function of RP2 is not fully understood. Here we report a novel in-frame 12-bp deletion (c.357_368del, p.Pro120_Gly123del) in zebrafish rp2 The mutant zebrafish shows reduced rod phototransduction proteins and progressive retinal degeneration. Interestingly, the protein level of mutant Rp2 is almost undetectable, whereas its mRNA level is near normal, indicating a possible post-translational effect of the mutation. Consistent with this hypothesis, the equivalent 12-bp deletion in human RP2 markedly impairs RP2 protein stability and reduces its protein level. Furthermore, we found that a majority of the RP2 pathogenic mutations (including missense, single-residue deletion, and C-terminal truncation mutations) severely destabilize the RP2 protein. The destabilized RP2 mutant proteins are degraded via the proteasome pathway, resulting in dramatically decreased protein levels. The remaining non-destabilizing mutations T87I, R118H/R118G/R118L/R118C, E138G, and R211H/R211L are suggested to impair the interaction between RP2 and its protein partners (such as ARL3) or with as yet unknown partners. By utilizing a combination of in silico, in vitro, and in vivo approaches, our work comprehensively indicates that loss of RP2 protein structural stability is the predominating pathogenic consequence for most RP2 mutations. Our study also reveals a role of the C-terminal domain of RP2 in maintaining the overall protein stability.
© 2017 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  RP2; mutant; protein degradation; protein stability; retinal degeneration; structural model; transcription activator-like effector nuclease (TALEN); zebrafish

Mesh:

Substances:

Year:  2017        PMID: 28209709      PMCID: PMC5391753          DOI: 10.1074/jbc.M116.760314

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  50 in total

1.  X-linked retinitis pigmentosa: mutation spectrum of the RPGR and RP2 genes and correlation with visual function.

Authors:  D Sharon; G A Bruns; T L McGee; M A Sandberg; E L Berson; T P Dryja
Journal:  Invest Ophthalmol Vis Sci       Date:  2000-08       Impact factor: 4.799

2.  Predicting changes in the stability of proteins and protein complexes: a study of more than 1000 mutations.

Authors:  Raphael Guerois; Jens Erik Nielsen; Luis Serrano
Journal:  J Mol Biol       Date:  2002-07-05       Impact factor: 5.469

3.  The retinitis pigmentosa protein RP2 interacts with polycystin 2 and regulates cilia-mediated vertebrate development.

Authors:  Toby Hurd; Weibin Zhou; Paul Jenkins; Chia-Jen Liu; Anand Swaroop; Hemant Khanna; Jeffrey Martens; Friedhelm Hildebrandt; Ben Margolis
Journal:  Hum Mol Genet       Date:  2010-08-20       Impact factor: 6.150

4.  Analysis of disease-linked rhodopsin mutations based on structure, function, and protein stability calculations.

Authors:  Elizabeth P Rakoczy; Christina Kiel; Richard McKeone; François Stricher; Luis Serrano
Journal:  J Mol Biol       Date:  2010-11-19       Impact factor: 5.469

5.  The stability effects of protein mutations appear to be universally distributed.

Authors:  Nobuhiko Tokuriki; Francois Stricher; Joost Schymkowitz; Luis Serrano; Dan S Tawfik
Journal:  J Mol Biol       Date:  2007-03-31       Impact factor: 5.469

6.  Functional overlap between retinitis pigmentosa 2 protein and the tubulin-specific chaperone cofactor C.

Authors:  Francesca Bartolini; Arunashree Bhamidipati; Scott Thomas; Uwe Schwahn; Sally A Lewis; Nicholas J Cowan
Journal:  J Biol Chem       Date:  2002-02-14       Impact factor: 5.157

7.  Comprehensive survey of mutations in RP2 and RPGR in patients affected with distinct retinal dystrophies: genotype-phenotype correlations and impact on genetic counseling.

Authors:  Valérie Pelletier; Marguerite Jambou; Nathalie Delphin; Elena Zinovieva; Morgane Stum; Nadine Gigarel; Hélène Dollfus; Christian Hamel; Annick Toutain; Jean-Louis Dufier; Olivier Roche; Arnold Munnich; Jean-Paul Bonnefont; Josseline Kaplan; Jean-Michel Rozet
Journal:  Hum Mutat       Date:  2007-01       Impact factor: 4.878

8.  Membrane protein transport in photoreceptors: the function of PDEδ: the Proctor lecture.

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Journal:  Invest Ophthalmol Vis Sci       Date:  2014-12-30       Impact factor: 4.799

9.  Loss of retinitis pigmentosa 2 (RP2) protein affects cone photoreceptor sensory cilium elongation in mice.

Authors:  Linjing Li; Kollu Nageswara Rao; Yun Zheng-Le; Toby W Hurd; Concepción Lillo; Hemant Khanna
Journal:  Cytoskeleton (Hoboken)       Date:  2015-10-14

10.  ARL3 regulates trafficking of prenylated phototransduction proteins to the rod outer segment.

Authors:  Zachary C Wright; Ratnesh K Singh; Ryan Alpino; Andrew F X Goldberg; Maxim Sokolov; Visvanathan Ramamurthy
Journal:  Hum Mol Genet       Date:  2016-03-02       Impact factor: 6.150

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1.  Deletion of the transmembrane protein Prom1b in zebrafish disrupts outer-segment morphogenesis and causes photoreceptor degeneration.

Authors:  Zhaojing Lu; Xuebin Hu; James Reilly; Danna Jia; Fei Liu; Shanshan Yu; Xiliang Liu; Shanglun Xie; Zhen Qu; Yayun Qin; Yuwen Huang; Yuexia Lv; Jingzhen Li; Pan Gao; Fulton Wong; Xinhua Shu; Zhaohui Tang; Mugen Liu
Journal:  J Biol Chem       Date:  2019-07-30       Impact factor: 5.157

2.  Characterization of a novel RP2-OSTF1 interaction and its implication for actin remodelling.

Authors:  Rodanthi Lyraki; Mandy Lokaj; Dinesh C Soares; Abigail Little; Matthieu Vermeren; Joseph A Marsh; Alfred Wittinghofer; Toby Hurd
Journal:  J Cell Sci       Date:  2018-02-20       Impact factor: 5.285

3.  Homozygous Variant in ARL3 Causes Autosomal Recessive Cone Rod Dystrophy.

Authors:  Shakeel A Sheikh; Robert A Sisk; Cara R Schiavon; Yar M Waryah; Muhammad A Usmani; David H Steel; John A Sayer; Ashok K Narsani; Robert B Hufnagel; Saima Riazuddin; Richard A Kahn; Ali M Waryah; Zubair M Ahmed
Journal:  Invest Ophthalmol Vis Sci       Date:  2019-11-01       Impact factor: 4.799

4.  A Zebrafish Model of Retinitis Pigmentosa Shows Continuous Degeneration and Regeneration of Rod Photoreceptors.

Authors:  Abirami Santhanam; Eyad Shihabeddin; Joshua A Atkinson; Duc Nguyen; Ya-Ping Lin; John O'Brien
Journal:  Cells       Date:  2020-10-06       Impact factor: 6.600

Review 5.  Developing Non-Human Primate Models of Inherited Retinal Diseases.

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Journal:  Genes (Basel)       Date:  2022-02-14       Impact factor: 4.096

Review 6.  Primary cilia biogenesis and associated retinal ciliopathies.

Authors:  Holly Y Chen; Ryan A Kelley; Tiansen Li; Anand Swaroop
Journal:  Semin Cell Dev Biol       Date:  2020-07-31       Impact factor: 7.727

7.  Comprehensive analysis of the NME gene family functions in breast cancer.

Authors:  Haoming Wu; Xinjian Huang; Siliang Chen; Siqi Li; Jikun Feng; Xiazi Zouxu; Zeming Xie; Xinhua Xie; Xi Wang
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