Literature DB >> 2820716

The origin of bidirectional DNA replication in polyoma virus.

E A Hendrickson1, C E Fritze, W R Folk, M L DePamphilis.   

Abstract

The nucleotide locations of RNA-p-DNA covalent linkages in polyoma virus (PyV) replicating DNA were mapped in the region containing the genetically required origin of DNA replication (ori). These linkages mark the initiation sites for RNA-primed DNA synthesis. A clear transition was identified between the presence of these linkages (discontinuous DNA synthesis) and their absence (continuous DNA synthesis) on each strand of ori. This demonstrated that PyV DNA replication, like simian virus 40 (SV40), is semi-discontinuous, and thus revealed the location of the origin of bidirectional DNA replication (OBR). The transition site on the template encoding PyV late mRNA occurred at the junction of ori-core and T-antigen binding site A. This was essentially the same site as previously observed in SV40 (Hay and DePamphilis, 1982). However, in contrast to SV40, the transition site on the template encoding PyV early mRNA was displaced towards the late gene side of ori. This resulted in a 16 nucleotide gap within ori in which no RNA-p-DNA linkages were observed on either strand. A model for the initiation of PyV DNA replication is presented.

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Year:  1987        PMID: 2820716      PMCID: PMC553590          DOI: 10.1002/j.1460-2075.1987.tb02465.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  48 in total

1.  Functional interactions of the simian virus 40 core origin of replication with flanking regulatory sequences.

Authors:  A L DeLucia; S Deb; K Partin; P Tegtmeyer
Journal:  J Virol       Date:  1986-01       Impact factor: 5.103

2.  Multiple initiation sites of DNA replication flanking the origin region of lambda dv genome.

Authors:  T Tsurimoto; K Matsubara
Journal:  Proc Natl Acad Sci U S A       Date:  1984-12       Impact factor: 11.205

3.  Location of sequences in polyomavirus DNA that are required for early gene expression in vivo and in vitro.

Authors:  C R Mueller; A M Mes-Masson; M Bouvier; J A Hassell
Journal:  Mol Cell Biol       Date:  1984-12       Impact factor: 4.272

4.  Two distinct enhancers with different cell specificities coexist in the regulatory region of polyoma.

Authors:  P Herbomel; B Bourachot; M Yaniv
Journal:  Cell       Date:  1984-12       Impact factor: 41.582

5.  DNA binding activity of polyoma virus large tumor antigen.

Authors:  S M Dilworth; A Cowie; R I Kamen; B E Griffin
Journal:  Proc Natl Acad Sci U S A       Date:  1984-04       Impact factor: 11.205

6.  Polyomavirus enhancer contains multiple redundant sequence elements that activate both DNA replication and gene expression.

Authors:  G M Veldman; S Lupton; R Kamen
Journal:  Mol Cell Biol       Date:  1985-04       Impact factor: 4.272

7.  DNA primase-DNA polymerase alpha from simian cells: sequence specificity of initiation sites on simian virus 40 DNA.

Authors:  M Yamaguchi; E A Hendrickson; M L DePamphilis
Journal:  Mol Cell Biol       Date:  1985-05       Impact factor: 4.272

8.  The distribution and properties of RNA primed initiation sites of DNA synthesis at the replication origin of Escherichia coli chromosome.

Authors:  Y Kohara; N Tohdoh; X W Jiang; T Okazaki
Journal:  Nucleic Acids Res       Date:  1985-10-11       Impact factor: 16.971

9.  Simian virus 40 DNA replication in vitro.

Authors:  J J Li; T J Kelly
Journal:  Proc Natl Acad Sci U S A       Date:  1984-11       Impact factor: 11.205

10.  Sequence specificity for the initiation of RNA-primed simian virus 40 DNA synthesis in vivo.

Authors:  R T Hay; E A Hendrickson; M L DePamphilis
Journal:  J Mol Biol       Date:  1984-05-15       Impact factor: 5.469

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  20 in total

1.  RIP60, a mammalian origin-binding protein, enhances DNA bending near the dihydrofolate reductase origin of replication.

Authors:  M S Caddle; L Dailey; N H Heintz
Journal:  Mol Cell Biol       Date:  1990-12       Impact factor: 4.272

Review 2.  Recognition mechanisms in the synthesis of animal virus DNA.

Authors:  R T Hay; W C Russell
Journal:  Biochem J       Date:  1989-02-15       Impact factor: 3.857

3.  T-antigen binding to site I facilitates initiation of SV40 DNA replication but does not affect bidirectionality.

Authors:  Z S Guo; U Heine; M L DePamphilis
Journal:  Nucleic Acids Res       Date:  1991-12       Impact factor: 16.971

4.  The yeast GAL4 protein transactivates the polyomavirus origin of DNA replication in mouse cells.

Authors:  M Baru; M Shlissel; H Manor
Journal:  J Virol       Date:  1991-07       Impact factor: 5.103

Review 5.  Relationship of eukaryotic DNA replication to committed gene expression: general theory for gene control.

Authors:  L P Villarreal
Journal:  Microbiol Rev       Date:  1991-09

6.  Identification of primary initiation sites for DNA replication in the hamster dihydrofolate reductase gene initiation zone.

Authors:  T Kobayashi; T Rein; M L DePamphilis
Journal:  Mol Cell Biol       Date:  1998-06       Impact factor: 4.272

7.  Replication-dependent transactivation of the polyomavirus late promoter.

Authors:  K B Cahill; A J Roome; G G Carmichael
Journal:  J Virol       Date:  1990-03       Impact factor: 5.103

8.  Asp-286----Asn-286 in polyomavirus large T antigen relaxes the specificity of binding to the polyomavirus origin.

Authors:  W J Tang; W R Folk
Journal:  J Virol       Date:  1989-01       Impact factor: 5.103

9.  Initiation of simian virus 40 DNA replication in vitro: identification of RNA-primed nascent DNA chains.

Authors:  J Taljanidisz; R S Decker; Z S Guo; M L DePamphilis; N Sarkar
Journal:  Nucleic Acids Res       Date:  1987-10-12       Impact factor: 16.971

10.  The DNA-binding properties of polyomavirus large T antigen are altered by ATP and other nucleotides.

Authors:  H E Lorimer; E H Wang; C Prives
Journal:  J Virol       Date:  1991-02       Impact factor: 5.103

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