Literature DB >> 28202597

Histone Lysine-to-Methionine Mutations Reduce Histone Methylation and Cause Developmental Pleiotropy.

Dean Sanders1,2, Shuiming Qian1,2, Rachael Fieweger1,2, Li Lu1,2, James A Dowell1,2, John M Denu1,2, Xuehua Zhong3,4.   

Abstract

Epigenetic modifications play critical roles in diverse biological processes. Histone Lys-to-Met (K-to-M) mutations act as gain-of-function mutations to inhibit a wide range of histone methyltransferases and are thought to promote tumorigenesis. However, it is largely unknown whether K-to-M mutations impact organismal development. Using Arabidopsis (Arabidopsis thaliana) as a model system, we discovered that a transgene exogenously expressing histone 3 Lys-36 to Met mutation (K36M) acts in a dominant-negative manner to cause global reduction of H3K36 methylation. Remarkably, this dominant repressive activity is dosage-dependent and causes strong developmental perturbations including extreme branching and early flowering by affecting the expression of genes involved in developmental and metabolic processes. Besides the established pathological roles of K-to-M mutations in tumor cells, we demonstrate a physiological outcome for K-to-M induced H3K36 hypomethylation. This study provides evidence for a conserved dominant-negative inhibitory role of histone K-to-M mutation across the plant and animal kingdoms. We also highlight the unique ability of K36M mutations to alter plant developmental processes leading to severe pleiotropic phenotypes. Finally, our data suggests K-to-M mutations may provide a useful strategy for altering epigenetic landscapes in organisms where histone methyltransferases are uncharacterized.
© 2017 The author(s). All Rights Reserved.

Entities:  

Mesh:

Substances:

Year:  2017        PMID: 28202597      PMCID: PMC5373047          DOI: 10.1104/pp.16.01499

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  43 in total

1.  Prevention of early flowering by expression of FLOWERING LOCUS C requires methylation of histone H3 K36.

Authors:  Zhong Zhao; Yu Yu; Denise Meyer; Chengjun Wu; Wen-Hui Shen
Journal:  Nat Cell Biol       Date:  2005-11-20       Impact factor: 28.824

2.  Inhibition of PRC2 activity by a gain-of-function H3 mutation found in pediatric glioblastoma.

Authors:  Peter W Lewis; Manuel M Müller; Matthew S Koletsky; Francisco Cordero; Shu Lin; Laura A Banaszynski; Benjamin A Garcia; Tom W Muir; Oren J Becher; C David Allis
Journal:  Science       Date:  2013-03-28       Impact factor: 47.728

3.  Di- and tri- but not monomethylation on histone H3 lysine 36 marks active transcription of genes involved in flowering time regulation and other processes in Arabidopsis thaliana.

Authors:  Lin Xu; Zhong Zhao; Aiwu Dong; Ludivine Soubigou-Taconnat; Jean-Pierre Renou; Andre Steinmetz; Wen-Hui Shen
Journal:  Mol Cell Biol       Date:  2007-12-10       Impact factor: 4.272

4.  Spatial clustering for identification of ChIP-enriched regions (SICER) to map regions of histone methylation patterns in embryonic stem cells.

Authors:  Shiliyang Xu; Sean Grullon; Kai Ge; Weiqun Peng
Journal:  Methods Mol Biol       Date:  2014

5.  High-resolution mapping of H4K16 and H3K23 acetylation reveals conserved and unique distribution patterns in Arabidopsis and rice.

Authors:  Li Lu; Xiangsong Chen; Dean Sanders; Shuiming Qian; Xuehua Zhong
Journal:  Epigenetics       Date:  2015       Impact factor: 4.528

6.  ZMYND11 links histone H3.3K36me3 to transcription elongation and tumour suppression.

Authors:  Hong Wen; Yuanyuan Li; Yuanxin Xi; Shiming Jiang; Sabrina Stratton; Danni Peng; Kaori Tanaka; Yongfeng Ren; Zheng Xia; Jun Wu; Bing Li; Michelle C Barton; Wei Li; Haitao Li; Xiaobing Shi
Journal:  Nature       Date:  2014-03-02       Impact factor: 49.962

7.  The early-flowering mutant efs is involved in the autonomous promotion pathway of Arabidopsis thaliana.

Authors:  W J Soppe; L Bentsink; M Koornneef
Journal:  Development       Date:  1999-11       Impact factor: 6.868

8.  Integrative epigenomic mapping defines four main chromatin states in Arabidopsis.

Authors:  François Roudier; Ikhlak Ahmed; Caroline Bérard; Alexis Sarazin; Tristan Mary-Huard; Sandra Cortijo; Daniel Bouyer; Erwann Caillieux; Evelyne Duvernois-Berthet; Liza Al-Shikhley; Laurène Giraut; Barbara Després; Stéphanie Drevensek; Frédy Barneche; Sandra Dèrozier; Véronique Brunaud; Sébastien Aubourg; Arp Schnittger; Chris Bowler; Marie-Laure Martin-Magniette; Stéphane Robin; Michel Caboche; Vincent Colot
Journal:  EMBO J       Date:  2011-04-12       Impact factor: 11.598

9.  Arabidopsis MRG domain proteins bridge two histone modifications to elevate expression of flowering genes.

Authors:  Yifeng Xu; Eng-Seng Gan; Jie Zhou; Wan-Yi Wee; Xiaoyu Zhang; Toshiro Ito
Journal:  Nucleic Acids Res       Date:  2014-09-02       Impact factor: 16.971

10.  TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions.

Authors:  Daehwan Kim; Geo Pertea; Cole Trapnell; Harold Pimentel; Ryan Kelley; Steven L Salzberg
Journal:  Genome Biol       Date:  2013-04-25       Impact factor: 13.583

View more
  6 in total

1.  Histone Acid Extraction and High Throughput Mass Spectrometry to Profile Histone Modifications in Arabidopsis thaliana.

Authors:  Ray Scheid; James A Dowell; Dean Sanders; Jianjun Jiang; John M Denu; Xuehua Zhong
Journal:  Curr Protoc       Date:  2022-08

2.  The plant-specific histone residue Phe41 is important for genome-wide H3.1 distribution.

Authors:  Li Lu; Xiangsong Chen; Shuiming Qian; Xuehua Zhong
Journal:  Nat Commun       Date:  2018-02-12       Impact factor: 14.919

3.  Profiling of H3K4me3 and H3K27me3 and Their Roles in Gene Subfunctionalization in Allotetraploid Cotton.

Authors:  Aicen Zhang; Yangyang Wei; Yining Shi; Xiaojuan Deng; Jingjing Gao; Yilong Feng; Dongyang Zheng; Xuejiao Cheng; Zhaoguo Li; Tao Wang; Kunbo Wang; Fang Liu; Renhai Peng; Wenli Zhang
Journal:  Front Plant Sci       Date:  2021-12-15       Impact factor: 5.753

4.  Methionine-induced regulation of growth, secondary metabolites and oxidative defense system in sunflower (Helianthus annuus L.) plants subjected to water deficit stress.

Authors:  Gull Mehak; Nudrat Aisha Akram; Muhammad Ashraf; Prashant Kaushik; Mohamed A El-Sheikh; Parvaiz Ahmad
Journal:  PLoS One       Date:  2021-12-09       Impact factor: 3.752

5.  Scaffolding proteins in pediatric glioma.

Authors:  Caroline Capdevielle; Martin Hagedorn
Journal:  Aging (Albany NY)       Date:  2021-10-26       Impact factor: 5.682

6.  An EZH2 blocker sensitizes histone mutated diffuse midline glioma to cholesterol metabolism inhibitors through an off-target effect.

Authors:  Farah Rahal; Caroline Capdevielle; Benoit Rousseau; Julien Izotte; Jean-William Dupuy; David Cappellen; Guillaume Chotard; Mélissa Ménard; Justine Charpentier; Vincent Jecko; Charline Caumont; Edouard Gimbert; Christophe F Grosset; Martin Hagedorn
Journal:  Neurooncol Adv       Date:  2022-03-01
  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.