Literature DB >> 28202363

Identifying different transcribed proteins in the newly described Theraphosidae Pamphobeteus verdolaga.

Sebastian Estrada-Gómez1, Leidy Johana Vargas-Muñoz2, Mónica Saldarriaga-Córdoba3, Yeimy Cifuentes4, Carlos Perafan5.   

Abstract

Theraphosidae spider venoms are well known for possess a complex mixture of protein and non-protein compounds in their venom. The objective of this study was to report and identify different proteins translated from the venom gland DNA information of the recently described Theraphosidae spider Pamphobeteus verdolaga. Using a venom gland transcriptomic analysis, we reported a set of the first complete sequences of seven different proteins of the recenlty described Theraphosidae spider P. verdolaga. Protein analysis indicates the presence of different proteins on the venom composition of this new spider, some of them uncommon in the Theraphosidae family. MS/MS analysis of P. verdolaga showed different fragments matching sphingomyelinases (sicaritoxin), barytoxins, hexatoxins, latroinsectotoxins, and linear (zadotoxins) peptides. Only four of the MS/MS fragments showed 100% sequence similarity with one of the transcribed proteins. Transcriptomic analysis showed the presence of different groups of proteins like phospholipases, hyaluronidases, inhibitory cysteine knots (ICK) peptides among others. The three database of protein domains used in this study (Pfam, SMART and CDD) showed congruency in the search of unique conserved protein domain for only four of the translated proteins. Those proteins matched with EF-hand proteins, cysteine rich secretory proteins, jingzhaotoxins, theraphotoxins and hexatoxins, from different Mygalomorphae spiders belonging to the families Theraphosidae, Barychelidae and Hexathelidae. None of the analyzed sequences showed a complete 100% similarity.
Copyright © 2017 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Pamphobeteus verdolaga; Proteomic; Theraphosidae; Transcriptomic

Mesh:

Substances:

Year:  2017        PMID: 28202363     DOI: 10.1016/j.toxicon.2017.02.004

Source DB:  PubMed          Journal:  Toxicon        ISSN: 0041-0101            Impact factor:   3.033


  4 in total

1.  Improving the Annotation of the Venom Gland Transcriptome of Pamphobeteus verdolaga, Prospecting Novel Bioactive Peptides.

Authors:  Cristian Salinas-Restrepo; Elizabeth Misas; Sebastian Estrada-Gómez; Juan Carlos Quintana-Castillo; Fanny Guzman; Juan C Calderón; Marco A Giraldo; Cesar Segura
Journal:  Toxins (Basel)       Date:  2022-06-15       Impact factor: 5.075

2.  MS/MS analysis of four scorpion venoms from Colombia: a descriptive approach.

Authors:  Sebastian Estrada-Gómez; Leidy Johana Vargas-Muñoz; Monica Maria Saldarriaga-Córdoba; Arie van der Meijden
Journal:  J Venom Anim Toxins Incl Trop Dis       Date:  2021-07-09

Review 3.  Spider Venom: Components, Modes of Action, and Novel Strategies in Transcriptomic and Proteomic Analyses.

Authors:  Nicolas Langenegger; Wolfgang Nentwig; Lucia Kuhn-Nentwig
Journal:  Toxins (Basel)       Date:  2019-10-22       Impact factor: 4.546

4.  Analysis of High Molecular Mass Compounds from the Spider Pamphobeteus verdolaga Venom Gland. A Transcriptomic and MS ID Approach.

Authors:  Sebastian Estrada-Gómez; Leidy Johana Vargas-Muñoz; Cesar Segura Latorre; Monica Maria Saldarriaga-Cordoba; Claudia Marcela Arenas-Gómez
Journal:  Toxins (Basel)       Date:  2021-06-29       Impact factor: 4.546

  4 in total

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