Literature DB >> 28196881

Engineered holocytochrome c synthases that biosynthesize new cytochromes c.

Deanna L Mendez1, Shalon E Babbitt1, Jeremy D King1, John D'Alessandro1, Michael B Watson2, Robert E Blankenship1, Liviu M Mirica2, Robert G Kranz3.   

Abstract

Cytochrome c (cyt c), required for electron transport in mitochondria, possesses a covalently attached heme cofactor. Attachment is catalyzed by holocytochrome c synthase (HCCS), leading to two thioether bonds between heme and a conserved CXXCH motif of cyt c In cyt c, histidine (His19) of CXXCH acts as an axial ligand to heme iron and upon release of holocytochrome c from HCCS, folding leads to formation of a second axial interaction with methionine (Met81). We previously discovered mutations in human HCCS that facilitate increased biosynthesis of cyt c in recombinant Escherichia coli Focusing on HCCS E159A, novel cyt c variants in quantities that are sufficient for biophysical analysis are biosynthesized. Cyt c H19M, the first bis-Met liganded cyt c, is compared with other axial ligand variants (M81A, M81H) and single thioether cyt c variants. For variants with axial ligand substitutions, electronic absorption, near-UV circular dichroism, and electron paramagnetic resonance spectroscopy provide evidence that axial ligands are changed and the heme environment is altered. Circular dichroism spectra in far UV and thermal denaturation analyses demonstrate that axial ligand changes do not affect secondary structures and stability. Redox potentials span a 400-mV range (+349 mV vs. standard hydrogen electrode, H19M; +252 mV, WT; -19 mV, M81A; -69 mV, M81H). We discuss the results in the context of a four-step mechanism for HCCS, whereby HCCS mutants such as E159A are enhanced in release (step 4) of cyt c from the HCCS active site; thus, we term these "release mutants."

Entities:  

Keywords:  HCCS; axial ligands; cytochrome c; heme; spectroscopy

Mesh:

Substances:

Year:  2017        PMID: 28196881      PMCID: PMC5338485          DOI: 10.1073/pnas.1615929114

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  42 in total

1.  A Compact Structure of Cytochrome c Trapped in a Lysine-Ligated State: Loop Refolding and Functional Implications of a Conformational Switch.

Authors:  Jeanine F Amacher; Fangfang Zhong; George P Lisi; Michael Q Zhu; Stephanie L Alden; Kevin R Hoke; Dean R Madden; Ekaterina V Pletneva
Journal:  J Am Chem Soc       Date:  2015-06-24       Impact factor: 15.419

Review 2.  Mitochondrial cytochrome c biogenesis: no longer an enigma.

Authors:  Shalon E Babbitt; Molly C Sutherland; Brian San Francisco; Deanna L Mendez; Robert G Kranz
Journal:  Trends Biochem Sci       Date:  2015-06-11       Impact factor: 13.807

3.  Comparing substrate specificity between cytochrome c maturation and cytochrome c heme lyase systems for cytochrome c biogenesis.

Authors:  Jesse G Kleingardner; Kara L Bren
Journal:  Metallomics       Date:  2011-03-07       Impact factor: 4.526

4.  Axial ligand replacement in horse heart cytochrome c by semisynthesis.

Authors:  A L Raphael; H B Gray
Journal:  Proteins       Date:  1989

5.  Spectroscopic properties of a mitochondrial cytochrome C with a single thioether bond to the heme prosthetic group.

Authors:  Federico I Rosell; A Grant Mauk
Journal:  Biochemistry       Date:  2002-06-18       Impact factor: 3.162

6.  The mitochondrial-targeted compound SS-31 re-energizes ischemic mitochondria by interacting with cardiolipin.

Authors:  Alexander V Birk; Shaoyi Liu; Yi Soong; William Mills; Pradeep Singh; J David Warren; Surya V Seshan; Joel D Pardee; Hazel H Szeto
Journal:  J Am Soc Nephrol       Date:  2013-07-11       Impact factor: 10.121

7.  Metalloproteins diversified: the auracyanins are a family of cupredoxins that stretch the spectral and redox limits of blue copper proteins.

Authors:  Jeremy D King; Chelsea L McIntosh; Christopher M Halsey; Bryan M Lada; Dariusz M Niedzwiedzki; Jason W Cooley; Robert E Blankenship
Journal:  Biochemistry       Date:  2013-11-06       Impact factor: 3.162

8.  Activation of the cytochrome cd1 nitrite reductase from Paracoccus pantotrophus. Reaction of oxidized enzyme with substrate drives a ligand switch at heme c.

Authors:  Jessica H van Wonderen; Christopher Knight; Vasily S Oganesyan; Simon J George; Walter G Zumft; Myles R Cheesman
Journal:  J Biol Chem       Date:  2007-07-10       Impact factor: 5.157

9.  Development of a heme protein structure-electrochemical function database.

Authors:  Charles J Reedy; Margaret M Elvekrog; Brian R Gibney
Journal:  Nucleic Acids Res       Date:  2007-10-11       Impact factor: 16.971

10.  Conserved residues of the human mitochondrial holocytochrome c synthase mediate interactions with heme.

Authors:  Shalon E Babbitt; Brian San Francisco; Eric C Bretsnyder; Robert G Kranz
Journal:  Biochemistry       Date:  2014-08-06       Impact factor: 3.162

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  3 in total

1.  Biosynthesis of Single Thioether c-Type Cytochromes Provides Insight into Mechanisms Intrinsic to Holocytochrome c Synthase (HCCS).

Authors:  Shalon E Babbitt; Jennifer Hsu; Deanna L Mendez; Robert G Kranz
Journal:  Biochemistry       Date:  2017-06-26       Impact factor: 3.162

2.  Oxidized or Reduced Cytochrome c and Axial Ligand Variants All Form the Apoptosome in Vitro.

Authors:  Deanna L Mendez; Ildikó V Akey; Christopher W Akey; Robert G Kranz
Journal:  Biochemistry       Date:  2017-05-19       Impact factor: 3.162

3.  Divergent Cytochrome c Maturation System in Kinetoplastid Protists.

Authors:  Asma Belbelazi; Rachel Neish; Martin Carr; Jeremy C Mottram; Michael L Ginger
Journal:  mBio       Date:  2021-05-04       Impact factor: 7.867

  3 in total

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