Literature DB >> 2819517

ELBAMAP: software for management of electrophoresis banding patterns.

G J King1.   

Abstract

ELBAMAP (Electrophoresis Band Management Package) is a 41-kbyte program written in Borland Turbo Pascal, which will run on IBM PC compatible machines. The program consists of 16 procedures involved in data entry, calculation, comparison and graphic representation of banding patterns. These procedures are selected interactively in response to a main menu and a series of prompts. Database files may be stored for subsequent analysis or addition of data. Pairwise comparisons of banding patterns may be stored as a similarity matrix suitable for use by other packages which will carry out multivariate or cluster analysis. The system has been used successfully for storage and comparison of plasmid DNA digest patterns analysed by agarose gel electrophoresis and seed promoter profiles analysed by SDS-polyacrylamide gel electrophoresis.

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Year:  1989        PMID: 2819517     DOI: 10.1093/bioinformatics/5.4.313

Source DB:  PubMed          Journal:  Comput Appl Biosci        ISSN: 0266-7061


  3 in total

1.  Multiple Vibrio vulnificus strains in oysters as demonstrated by clamped homogeneous electric field gel electrophoresis.

Authors:  C Buchrieser; V V Gangar; R L Murphree; M L Tamplin; C W Kaspar
Journal:  Appl Environ Microbiol       Date:  1995-03       Impact factor: 4.792

2.  Phylogenetic and epidemiological analysis of Neisseria meningitidis using DNA probes.

Authors:  H Ni; A I Knight; K A Cartwright; J J McFadden
Journal:  Epidemiol Infect       Date:  1992-10       Impact factor: 2.451

3.  Pulsed-field fingerprinting of listeriae: identification of genomic divisions for Listeria monocytogenes and their correlation with serovar.

Authors:  R Brosch; J Chen; J B Luchansky
Journal:  Appl Environ Microbiol       Date:  1994-07       Impact factor: 4.792

  3 in total

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