| Literature DB >> 28195137 |
Yingqian Peng1,2,3, Wei Zhang4, Ping Yang1,2,3, Ye Tian1,2,3,5,6, Shizhen Su1,2,3, Changming Zhang1,2,3, Zi-Jiang Chen1,3,3,5, Han Zhao1,2,3.
Abstract
A recent genome-wide association study (GWAS) of polycystic ovary syndrome (PCOS) in European cohorts has identified six susceptibility loci mapping to 11q22.1 (YAP1), 2p21 (THADA), 11p14.1 (FSHB), 2q34 (ERBB4), 12q21.2 (KRR1), and 5q31.1 (RAD50). The loci of 11q22.1, 2p21 and 11p14.1 have been confirmed to be associated with PCOS in Chinese; whereas the other three new loci (2q34, 12q21.2, and 5q31.1) still need to be evaluated in Chinese. This study was aimed to determine if the three new loci identified in European PCOS also confer risks for PCOS in Han Chinese. We performed a case-control genetic association study comprising 1500 PCOS cases and 1220 age-matched control subjects. Marker SNPs rs1351592 (2q34, ERBB4), rs1275468 (12q21.2, KRR1) and rs13164856 (5q31.1, RAD50) were genotyped using TaqMan-MGB probe assay. Genotyping analysis showed the allele frequency of rs1351592 in gene ERBB4 was significantly different (P = 1.05E-03) between PCOS cases and control group, and remained significant even after BMI adjustment (Padjusted = 2.09E-04). However, the allele frequencies of the other two risk variants, rs1275468 (12q21.2, KRR1) and rs13164856 (5q31.1, RAD50), were not significantly different in the replication cohort. Our results demonstrate that ERBB4, with the strongest association in European PCOS, also confers risk for PCOS in Han Chinese.Entities:
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Year: 2017 PMID: 28195137 PMCID: PMC5307312 DOI: 10.1038/srep42000
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
The clinical characteristics of PCOS patients and control subjects.
| PCOS | Control | ||
|---|---|---|---|
| 1500 | 1220 | ||
| 29(27–32) | 29(25–34) | 0.396 | |
| 24.22(21.47–27.73) | 21.88(19.95–24.12) | <0.001 | |
| 6.12(5.16–7.08) | 6.86(5.92–8.33) | <0.001 | |
| 9.36(6.12–13.39) | 4.70(3.51–6.01) | <0.001 | |
| 43.73(31.49–54.15) | 27.65(19.98–38.18) | <0.001 |
BMI: body mass index. FSH: follicle stimulating hormone. LH: luteinizing hormone. T: testosterone.
aData are presented as median (interquartile ranges).
Allele frequencies in PCOS cases and controls.
| SNPs | Allele | PCOS | Control | OR | ||
|---|---|---|---|---|---|---|
| rs1351592 | 0.143 | 0.113 | 1.310(1.114–1.540) | 1.05E-03 | 2.09E-04 | |
| rs1275468 | 0.615 | 0.598 | 1.074(0.963–1.198) | 0.202 | 0.095 | |
| rs13164856 | 0.767 | 0.751 | 1.088(0.960–1.233) | 0.185 | 0.268 |
P: calculated by logistic regression analysis taking BMI as covariant.
Bold face indicates the effect allele.
Allele and Genotype analysis in different subgroups of PCOS.
| Subgroups | N | Genotype (GG/GC/CC) | MAF | OR(95%CI) | ||
|---|---|---|---|---|---|---|
| Total PCOS | 1500 | 33/362/1105 | 0.143 | 1.05E-03 | 1.310(1.114–1.540) | 2.09E-04 |
| OA + HA | 9 | 0/3/6 | — | — | — | — |
| OA + PCO | 1044 | 18/248/778 | 0.136 | 1.75E-02 | 1.239(1.038–1.480) | 3.85E-03 |
| HA + PCO | 16 | 0/6/10 | — | — | — | — |
| OA + HA + PCO | 352 | 13/84/255 | 0.156 | 1.90E-03 | 1.458(1.148–1.852) | 9.97E-04 |
P: calculated by logistic regression analysis taking BMI as covariant.