Literature DB >> 28190869

Single molecule detection, thermal fluctuation and life.

Toshio Yanagida1, Yoshiharu Ishii.   

Abstract

Single molecule detection has contributed to our understanding of the unique mechanisms of life. Unlike artificial man-made machines, biological molecular machines integrate thermal noises rather than avoid them. For example, single molecule detection has demonstrated that myosin motors undergo biased Brownian motion for stepwise movement and that single protein molecules spontaneously change their conformation, for switching to interactions with other proteins, in response to thermal fluctuation. Thus, molecular machines have flexibility and efficiency not seen in artificial machines.

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Year:  2017        PMID: 28190869      PMCID: PMC5422627          DOI: 10.2183/pjab.93.004

Source DB:  PubMed          Journal:  Proc Jpn Acad Ser B Phys Biol Sci        ISSN: 0386-2208            Impact factor:   3.493


  55 in total

Review 1.  Fluorescence correlations, single molecule detection and large number screening. Applications in biotechnology.

Authors:  R Rigler
Journal:  J Biotechnol       Date:  1995-07-31       Impact factor: 3.307

2.  Extensibility of the actin and myosin filaments in various states of skeletal muscle as studied by X-ray diffraction.

Authors:  Y Takezawa; Y Sugimoto; K Wakabayashi
Journal:  Adv Exp Med Biol       Date:  1998       Impact factor: 2.622

3.  Single-molecule fluorescence spectroscopy of enzyme conformational dynamics and cleavage mechanism.

Authors:  T Ha; A Y Ting; J Liang; W B Caldwell; A A Deniz; D S Chemla; P G Schultz; S Weiss
Journal:  Proc Natl Acad Sci U S A       Date:  1999-02-02       Impact factor: 11.205

4.  Multiple- and single-molecule analysis of the actomyosin motor by nanometer-piconewton manipulation with a microneedle: unitary steps and forces.

Authors:  A Ishijima; H Kojima; H Higuchi; Y Harada; T Funatsu; T Yanagida
Journal:  Biophys J       Date:  1996-01       Impact factor: 4.033

5.  Right-handed rotation of an actin filament in an in vitro motile system.

Authors:  T Nishizaka; T Yagi; Y Tanaka; S Ishiwata
Journal:  Nature       Date:  1993-01-21       Impact factor: 49.962

6.  Structural dynamics of F-actin: I. Changes in the C terminus.

Authors:  A Orlova; E H Egelman
Journal:  J Mol Biol       Date:  1995-02-03       Impact factor: 5.469

7.  Direct observation of motion of single F-actin filaments in the presence of myosin.

Authors:  T Yanagida; M Nakase; K Nishiyama; F Oosawa
Journal:  Nature       Date:  1984 Jan 5-11       Impact factor: 49.962

8.  Regional polysterism in the GTP-bound form of the human c-Ha-Ras protein.

Authors:  Y Ito; K Yamasaki; J Iwahara; T Terada; A Kamiya; M Shirouzu; Y Muto; G Kawai; S Yokoyama; E D Laue; M Wälchli; T Shibata; S Nishimura; T Miyazawa
Journal:  Biochemistry       Date:  1997-07-29       Impact factor: 3.162

9.  Sliding distance of actin filament induced by a myosin crossbridge during one ATP hydrolysis cycle.

Authors:  T Yanagida; T Arata; F Oosawa
Journal:  Nature       Date:  1985 Jul 25-31       Impact factor: 49.962

10.  From single molecule fluctuations to muscle contraction: a Brownian model of A.F. Huxley's hypotheses.

Authors:  Lorenzo Marcucci; Toshio Yanagida
Journal:  PLoS One       Date:  2012-07-16       Impact factor: 3.240

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  3 in total

Review 1.  Multiomic technologies for analyses of inborn errors of immunity: from snapshot of the average cell to dynamic temporal picture at single-cell resolution.

Authors:  Yusuke Kawashima; Ryuta Nishikomori; Osamu Ohara
Journal:  Inflamm Regen       Date:  2021-07-01

Review 2.  Biomimetic and Biological Nanoarchitectonics.

Authors:  Katsuhiko Ariga
Journal:  Int J Mol Sci       Date:  2022-03-25       Impact factor: 5.923

Review 3.  Molecule-to-Material-to-Bio Nanoarchitectonics with Biomedical Fullerene Nanoparticles.

Authors:  Xuechen Shen; Jingwen Song; Kohsaku Kawakami; Katsuhiko Ariga
Journal:  Materials (Basel)       Date:  2022-08-05       Impact factor: 3.748

  3 in total

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