Literature DB >> 28189994

Molecular dynamics simulations of NMR relaxation and diffusion of bulk hydrocarbons and water.

Philip M Singer1, Dilip Asthagiri2, Walter G Chapman2, George J Hirasaki2.   

Abstract

Molecular dynamics (MD) simulations are used to investigate 1H nuclear magnetic resonance (NMR) relaxation and diffusion of bulk n-C5H12 to n-C17H36 hydrocarbons and bulk water. The MD simulations of the 1H NMR relaxation times T1,2 in the fast motion regime where T1=T2 agree with measured (de-oxygenated) T2 data at ambient conditions, without any adjustable parameters in the interpretation of the simulation data. Likewise, the translational diffusion DT coefficients calculated using simulation configurations agree with measured diffusion data at ambient conditions. The agreement between the predicted and experimentally measured NMR relaxation times and diffusion coefficient also validate the forcefields used in the simulation. The molecular simulations naturally separate intramolecular from intermolecular dipole-dipole interactions helping bring new insight into the two NMR relaxation mechanisms as a function of molecular chain-length (i.e. carbon number). Comparison of the MD simulation results of the two relaxation mechanisms with traditional hard-sphere models used in interpreting NMR data reveals important limitations in the latter. With increasing chain length, there is substantial deviation in the molecular size inferred on the basis of the radius of gyration from simulation and the fitted hard-sphere radii required to rationalize the relaxation times. This deviation is characteristic of the local nature of the NMR measurement, one that is well-captured by molecular simulations.
Copyright © 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Autocorrelation function; Hard-sphere model; Intermolecular relaxation; Intramolecular relaxation

Year:  2017        PMID: 28189994     DOI: 10.1016/j.jmr.2017.02.001

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  2 in total

1.  Rotational and Translational Diffusion of Proteins as a Function of Concentration.

Authors:  Zahedeh Bashardanesh; Johan Elf; Haiyang Zhang; David van der Spoel
Journal:  ACS Omega       Date:  2019-11-27

2.  Fluid-solid phase transition of n-alkane mixtures: Coarse-grained molecular dynamics simulations and diffusion-ordered spectroscopy nuclear magnetic resonance.

Authors:  S Shahruddin; G Jiménez-Serratos; G J P Britovsek; O K Matar; E A Müller
Journal:  Sci Rep       Date:  2019-01-30       Impact factor: 4.379

  2 in total

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