Literature DB >> 28189386

Characterising pandemic severity and transmissibility from data collected during first few hundred studies.

Andrew J Black1, Nicholas Geard2, James M McCaw3, Jodie McVernon4, Joshua V Ross5.   

Abstract

Early estimation of the probable impact of a pandemic influenza outbreak can assist public health authorities to ensure that response measures are proportionate to the scale of the threat. Recently, frameworks based on transmissibility and severity have been proposed for initial characterization of pandemic impact. Data requirements to inform this assessment may be provided by "First Few Hundred" (FF100) studies, which involve surveillance-possibly in person, or via telephone-of household members of confirmed cases. This process of enhanced case finding enables detection of cases across the full spectrum of clinical severity, including the date of symptom onset. Such surveillance is continued until data for a few hundred cases, or satisfactory characterization of the pandemic strain, has been achieved. We present a method for analysing these data, at the household level, to provide a posterior distribution for the parameters of a model that can be interpreted in terms of severity and transmissibility of a pandemic strain. We account for imperfect case detection, where individuals are only observed with some probability that can increase after a first case is detected. Furthermore, we test this methodology using simulated data generated by an independent model, developed for a different purpose and incorporating more complex disease and social dynamics. Our method recovers transmissibility and severity parameters to a high degree of accuracy and provides a computationally efficient approach to estimating the impact of an outbreak in its early stages.
Copyright © 2017 The Author(s). Published by Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Households; Influenza; Markov chain; Pandemic; Parameter inference

Mesh:

Year:  2017        PMID: 28189386     DOI: 10.1016/j.epidem.2017.01.004

Source DB:  PubMed          Journal:  Epidemics        ISSN: 1878-0067            Impact factor:   4.396


  12 in total

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3.  Estimation in emerging epidemics: biases and remedies.

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4.  Identification of the relative timing of infectiousness and symptom onset for outbreak control.

Authors:  Robert C Cope; Joshua V Ross
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5.  Infectious disease pandemic planning and response: Incorporating decision analysis.

Authors:  Freya M Shearer; Robert Moss; Jodie McVernon; Joshua V Ross; James M McCaw
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6.  Priority allocation of pandemic influenza vaccines in Australia - Recommendations of 3 community juries.

Authors:  C Degeling; J Williams; S M Carter; R Moss; P Massey; G L Gilbert; P Shih; A Braunack-Mayer; K Crooks; D Brown; J McVernon
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7.  Key questions for modelling COVID-19 exit strategies.

Authors:  Robin N Thompson; T Déirdre Hollingsworth; Valerie Isham; Daniel Arribas-Bel; Ben Ashby; Tom Britton; Peter Challenor; Lauren H K Chappell; Hannah Clapham; Nik J Cunniffe; A Philip Dawid; Christl A Donnelly; Rosalind M Eggo; Sebastian Funk; Nigel Gilbert; Paul Glendinning; Julia R Gog; William S Hart; Hans Heesterbeek; Thomas House; Matt Keeling; István Z Kiss; Mirjam E Kretzschmar; Alun L Lloyd; Emma S McBryde; James M McCaw; Trevelyan J McKinley; Joel C Miller; Martina Morris; Philip D O'Neill; Kris V Parag; Carl A B Pearson; Lorenzo Pellis; Juliet R C Pulliam; Joshua V Ross; Gianpaolo Scalia Tomba; Bernard W Silverman; Claudio J Struchiner; Michael J Tildesley; Pieter Trapman; Cerian R Webb; Denis Mollison; Olivier Restif
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8.  Using statistics and mathematical modelling to understand infectious disease outbreaks: COVID-19 as an example.

Authors:  Christopher E Overton; Helena B Stage; Shazaad Ahmad; Jacob Curran-Sebastian; Paul Dark; Rajenki Das; Elizabeth Fearon; Timothy Felton; Martyn Fyles; Nick Gent; Ian Hall; Thomas House; Hugo Lewkowicz; Xiaoxi Pang; Lorenzo Pellis; Robert Sawko; Andrew Ustianowski; Bindu Vekaria; Luke Webb
Journal:  Infect Dis Model       Date:  2020-07-04

Review 9.  A review of documents prepared by international organizations about influenza pandemics, including the 2009 pandemic: a bibliometric analysis.

Authors:  Feng Liang; Peng Guan; Wei Wu; Jing Liu; Ning Zhang; Bao-Sen Zhou; De-Sheng Huang
Journal:  BMC Infect Dis       Date:  2018-08-08       Impact factor: 3.090

10.  Estimation of the force of infection and infectious period of skin sores in remote Australian communities using interval-censored data.

Authors:  Michael J Lydeamore; Patricia T Campbell; David J Price; Yue Wu; Adrian J Marcato; Will Cuningham; Jonathan R Carapetis; Ross M Andrews; Malcolm I McDonald; Jodie McVernon; Steven Y C Tong; James M McCaw
Journal:  PLoS Comput Biol       Date:  2020-10-05       Impact factor: 4.475

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