Literature DB >> 28182721

Correction: What Do Pneumocystis Organisms Tell Us about the Phylogeography of Their Hosts? The Case of the Woodmouse Apodemus sylvaticus in Continental Europe and Western Mediterranean Islands.

Christine Demanche, Manjula Deville, Johan Michaux, Véronique Barriel, Claire Pinçon, Cécile Marie Aliouat-Denis, Muriel Pottier, Christophe Noël, Eric Viscogliosi, El Moukhtar Aliouat, Eduardo Dei-Cas, Serge Morand, Jacques Guillot.   

Abstract

[This corrects the article DOI: 10.1371/journal.pone.0120839.].

Entities:  

Year:  2017        PMID: 28182721      PMCID: PMC5300120          DOI: 10.1371/journal.pone.0171282

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


Upon re-examination of the samples included in this study, the authors have established that Cal6 is Apodemus flavicollis and not Apodemus sylvaticus as originally reported [1]. The identification of the Apodemus mice samples was completed following the protocol described in Michaux et al. [2] based on the sequencing of a mitochondrial cytochrome b fragment. All samples included in this study have been checked using this method. The sequence obtained from sample Cal6 is in accordance with Apodemus flavicollis. This single result does not affect the general conclusions of the article. A recent study showed that Apodemus flavicollis and Apodemus sylvaticus may harbor the same Pneumocystis type [3]. These Apodemus species are closely related ecologically and phylogenetically. They can be trapped together and also show a high level of sympatry. They are members of the same subgenus Sylvaemus [4]. Furthermore, this result could be also explained by the fact that the densities of A. flavicollis can be more important in these regions with regard to A. sylvaticus. This would favor the spill-over of Pneumocystis between the two Apodemus species in these areas. Such a spill-over, which can lead to host switch, was already observed in the study of Danesi et al. [3], which also supported a host-specificity of Pneumocystis at least at the genus level. We are including with this Correction a table listing the Apodemus individuals with details on their identification (Table 1). The amplified sequence for Cal6 has been deposited in the European Nucleotide Archive under accession number: LT622178, http://www.ebi.ac.uk/ena/data/view/LT622178.
Table 1

List of Apodemus individuals with ID references, locality, sex, month and year of trapping, season of trapping, weigh (in g) and age.

Species determination were based on morphology and genetic markers [5], [6], [7].

IDCurrent studyIDGoüy de Bellocq (PhD Thesis 2003) [6]ID FieldLocalitySpecies*Reference for Species IDSexMonth/YearSeasonWeight (g)Age
Cal8C801 10 08 07CalabriaA. sylvaticus[6], [7]M10/2001Autumn16.54
Cal39C3901 10 10 09CalabriaA. sylvaticus[6], [7]F10/2001Autumn16.02
Cal7C701 10 10 17CalabriaA. sylvaticus[6], [7]M10/2001Autumn21.53
Cal6C601 10 10 05CalabriaA. flavicolisCurrent study-10/2001Autumn--
Mon23M2301 05 23 04MontpellierA. sylvaticus[6], [7]F05/2001Spring20.04
Mon6M601 05 22 05MontpellierA. sylvaticus[6], [7]M05/2001Spring29.04
Mon4M401 05 21 04MontpellierA. sylvaticus[6], [7]F05/2001Spring22.0-
Mon12M1201 05 23 07MontpellierA. sylvaticus[6], [7]M05/2001Spring30.04
Mon5M501 05 21 05MontpellierA. sylvaticus[6], [7]M05/2001Spring21.0-
Pyr1F100 12 01 01PyrénéesA. sylvaticus[6], [7]-12/2000Winter--
Pyr3F300 12 01 03PyrénéesA. sylvaticus[6], [7]-12/2000Winter--
Pyr14F1400 11 30 08PyrénéesA. sylvaticus[6], [7]-12/2000Winter--
Spa19E1901 09 25 07MontsenyA. sylvaticus[6], [7]M10/2001Autumn27.03
Spa4E401 09 26 01MontsenyA. sylvaticus[6], [7]M10/2001Autumn24.03
Spa5E501 10 18 01MontsenyA. sylvaticus[6], [7]M10/2001Autumn27.03
Spa3E301 09 25 09MontsenyA. sylvaticus[6], [7]-10/2001Autumn--
Spa15E1501 09 24 01MontsenyA. sylvaticus[6], [7]-10/2001Autumn--
Por15M1501 04 23 04PorquerollesA. sylvaticus[6], [7]M05/2001Spring26.02
Sc3S301 10 12 02SicilyA. sylvaticus[6], [7]F10/2001Autumn26.03
Sc9S901 10 11 12SicilyA. sylvaticus[6], [7]F10/2001Autumn25.04
Sc8S801 10 11 06SicilyA. sylvaticus[6], [7]F10/2001Autumn30.5-
Sc14S1401 10 11 05SicilyA. sylvaticus[6], [7]F10/2001Autumn17.04
Sc12S1201 10 09 15SicilyA. sylvaticus[6], [7]F10/2001Autumn22.04
Sc5S501 10 11 02SicilyA. sylvaticus[6], [7]M10/2001Autumn27.53
Sc16S1601 10 11 03SicilyA. sylvaticus[6], [7]F10/2001Autumn10.02
Sc13S1301 10 09 08SicilyA. sylvaticus[6], [7]F10/2001Autumn25.04
Ma51M5101 07 18 01MallorcaA. sylvaticus[6], [7]M07/2001Summer16.0-
Ma66M6601 07 13 01MallorcaA. sylvaticus[6], [7]M07/2001Summer19.0-
Ma47M4701 07 19 03MallorcaA. sylvaticus[6], [7]F07/2001Summer18.03
Ma59M5901 07 18 05MallorcaA. sylvaticus[6], [7]M07/2001Summer19.03
Ma53M5301 07 18 03MallorcaA. sylvaticus[6], [7]M07/2001Summer27.0-
Ma62M6201 07 20 04MallorcaA. sylvaticus[6], [7]F07/2001Summer20.03
Ma71M71-MallorcaA. sylvaticus[6], [7]-----
Mn58ME5801 07 26 04MenorcaA. sylvaticus[6], [7]M07/2001Summer29.54
Mn33ME3301 07 25 01MenorcaA. sylvaticus[6], [7]M07/2001Summer29.04
Cor1Co101 11 08 06CorsicaA. sylvaticus[6], [7]-11/2001Winter--
Cor2C0201 11 08 24CorsicaA. sylvaticus[6], [7]-11/2001Winter--
Cor5Co501 11 14 02CorsicaA. sylvaticus[6], [7]-11/2001Winter--

* Apodemus sylvaticus is the only Apodemus species found on Mediterranean islands [4]: Corsica, Menorca, Mallorca, Sicily, Porquerolles

Apodemus sylvaticus and Apodemus flavicollis can be found in sympatry in Py and Calabria [5], [4]

List of Apodemus individuals with ID references, locality, sex, month and year of trapping, season of trapping, weigh (in g) and age.

Species determination were based on morphology and genetic markers [5], [6], [7]. * Apodemus sylvaticus is the only Apodemus species found on Mediterranean islands [4]: Corsica, Menorca, Mallorca, Sicily, Porquerolles Apodemus sylvaticus and Apodemus flavicollis can be found in sympatry in Py and Calabria [5], [4]
  5 in total

1.  Mitochondrial phylogeography of the Woodmouse (Apodemus sylvaticus) in the Western Palearctic region.

Authors:  J R Michaux; E Magnanou; E Paradis; C Nieberding; R Libois
Journal:  Mol Ecol       Date:  2003-03       Impact factor: 6.185

2.  Is there sex-biased resistance and tolerance in Mediterranean wood mouse (Apodemus sylvaticus) populations facing multiple helminth infections?

Authors:  Frédéric Bordes; Nicolas Ponlet; Joëlle Goüy de Bellocq; Alexis Ribas; Boris R Krasnov; Serge Morand
Journal:  Oecologia       Date:  2012-03-20       Impact factor: 3.225

3.  Barcoding markers for Pneumocystis species in wildlife.

Authors:  Patrizia Danesi; Graziana da Rold; Annapaola Rizzoli; Heidi C Hauffe; Stefano Marangon; Kittipan Samerpitak; Cristine Demanche; Jacques Guillot; Gioia Capelli; Sybren G de Hoog
Journal:  Fungal Biol       Date:  2015-09-05

4.  So close and so different: comparative phylogeography of two small mammal species, the yellow-necked fieldmouse (Apodemus flavicollis) and the woodmouse (Apodemus sylvaticus) in the Western Palearctic region.

Authors:  J R Michaux; R Libois; M-G Filippucci
Journal:  Heredity (Edinb)       Date:  2005-01       Impact factor: 3.821

5.  What do Pneumocystis organisms tell us about the phylogeography of their hosts? The case of the woodmouse Apodemus sylvaticus in continental Europe and western Mediterranean islands.

Authors:  Christine Demanche; Manjula Deville; Johan Michaux; Véronique Barriel; Claire Pinçon; Cécile Marie Aliouat-Denis; Muriel Pottier; Christophe Noël; Eric Viscogliosi; El Moukhtar Aliouat; Eduardo Dei-Cas; Serge Morand; Jacques Guillot
Journal:  PLoS One       Date:  2015-04-01       Impact factor: 3.240

  5 in total

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