Literature DB >> 28169999

Mechanisms for targeted, purposeful mutation revealed in an APOBEC-DNA complex.

Emily K Schutsky1, Zachary M Hostetler1, Rahul M Kohli1.   

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Year:  2017        PMID： 28169999     DOI： 10.1038/nsmb.3373

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN： 1545-9985            Impact factor:   15.369


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  20 in total

1.  A portable hot spot recognition loop transfers sequence preferences from APOBEC family members to activation-induced cytidine deaminase.

Authors:  Rahul M Kohli; Shaun R Abrams; Kiran S Gajula; Robert W Maul; Patricia J Gearhart; James T Stivers
Journal:  J Biol Chem       Date:  2009-06-26       Impact factor: 5.157

Review 2.  DNA Base Flipping: A General Mechanism for Writing, Reading, and Erasing DNA Modifications.

Authors:  Samuel Hong; Xiaodong Cheng
Journal:  Adv Exp Med Biol       Date:  2016       Impact factor: 2.622

3.  Clustered mutations in yeast and in human cancers can arise from damaged long single-strand DNA regions.

Authors:  Steven A Roberts; Joan Sterling; Cole Thompson; Shawn Harris; Deepak Mav; Ruchir Shah; Leszek J Klimczak; Gregory V Kryukov; Ewa Malc; Piotr A Mieczkowski; Michael A Resnick; Dmitry A Gordenin
Journal:  Mol Cell       Date:  2012-05-17       Impact factor: 17.970

4.  Chromothripsis and Kataegis Induced by Telomere Crisis.

Authors:  John Maciejowski; Yilong Li; Nazario Bosco; Peter J Campbell; Titia de Lange
Journal:  Cell       Date:  2015-12-17       Impact factor: 41.582

5.  APOBEC3B is an enzymatic source of mutation in breast cancer.

Authors:  Michael B Burns; Lela Lackey; Michael A Carpenter; Anurag Rathore; Allison M Land; Brandon Leonard; Eric W Refsland; Delshanee Kotandeniya; Natalia Tretyakova; Jason B Nikas; Douglas Yee; Nuri A Temiz; Duncan E Donohue; Rebecca M McDougle; William L Brown; Emily K Law; Reuben S Harris
Journal:  Nature       Date:  2013-02-06       Impact factor: 49.962

6.  The ssDNA Mutator APOBEC3A Is Regulated by Cooperative Dimerization.

Authors:  Markus-Frederik Bohn; Shivender M D Shandilya; Tania V Silvas; Ellen A Nalivaika; Takahide Kouno; Brian A Kelch; Sean P Ryder; Nese Kurt-Yilmaz; Mohan Somasundaran; Celia A Schiffer
Journal:  Structure       Date:  2015-04-23       Impact factor: 5.006

7.  Crystal Structure of the DNA Deaminase APOBEC3B Catalytic Domain.

Authors:  Ke Shi; Michael A Carpenter; Kayo Kurahashi; Reuben S Harris; Hideki Aihara
Journal:  J Biol Chem       Date:  2015-09-28       Impact factor: 5.157

Review 8.  CRISPR-Based Technologies for the Manipulation of Eukaryotic Genomes.

Authors:  Alexis C Komor; Ahmed H Badran; David R Liu
Journal:  Cell       Date:  2016-11-17       Impact factor: 41.582

9.  Structural basis for targeted DNA cytosine deamination and mutagenesis by APOBEC3A and APOBEC3B.

Authors:  Ke Shi; Michael A Carpenter; Surajit Banerjee; Nadine M Shaban; Kayo Kurahashi; Daniel J Salamango; Jennifer L McCann; Gabriel J Starrett; Justin V Duffy; Özlem Demir; Rommie E Amaro; Daniel A Harki; Reuben S Harris; Hideki Aihara
Journal:  Nat Struct Mol Biol       Date:  2016-12-19       Impact factor: 15.369

10.  NMR structure of human restriction factor APOBEC3A reveals substrate binding and enzyme specificity.

Authors:  In-Ja L Byeon; Jinwoo Ahn; Mithun Mitra; Chang-Hyeock Byeon; Kamil Hercík; Jozef Hritz; Lisa M Charlton; Judith G Levin; Angela M Gronenborn
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919
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