Literature DB >> 28157283

Active Site Binding Is Not Sufficient for Reductive Deiodination by Iodotyrosine Deiodinase.

Nattha Ingavat1, Jennifer M Kavran2,3, Zuodong Sun1, Steven E Rokita1.   

Abstract

The minimal requirements for substrate recognition and turnover by iodotyrosine deiodinase were examined to learn the basis for its catalytic specificity. This enzyme is crucial for iodide homeostasis and the generation of thyroid hormone in chordates. 2-Iodophenol binds only very weakly to the human enzyme and is dehalogenated with a kcat/Km that is more than 4 orders of magnitude lower than that for iodotyrosine. This discrimination likely protects against a futile cycle of iodinating and deiodinating precursors of thyroid hormone biosynthesis. Surprisingly, a very similar catalytic selectivity was expressed by a bacterial homologue from Haliscomenobacter hydrossis. In this example, discrimination was not based on affinity since 4-cyano-2-iodophenol bound to the bacterial deiodinase with a Kd lower than that of iodotyrosine and yet was not detectably deiodinated. Other phenols including 2-iodophenol were deiodinated but only very inefficiently. Crystal structures of the bacterial enzyme with and without bound iodotyrosine are nearly superimposable and quite similar to the corresponding structures of the human enzyme. Likewise, the bacterial enzyme is activated for single electron transfer after binding to the substrate analogue fluorotyrosine as previously observed with the human enzyme. A cocrystal structure of bacterial deiodinase and 2-iodophenol indicates that this ligand stacks on the active site flavin mononucleotide (FMN) in a orientation analogous to that of bound iodotyrosine. However, 2-iodophenol association is not sufficient to activate the FMN chemistry required for catalysis, and thus the bacterial enzyme appears to share a similar specificity for halotyrosines even though their physiological roles are likely very different from those in humans.

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Year:  2017        PMID: 28157283      PMCID: PMC5330855          DOI: 10.1021/acs.biochem.6b01308

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  45 in total

1.  A switch between one- and two-electron chemistry of the human flavoprotein iodotyrosine deiodinase is controlled by substrate.

Authors:  Jimin Hu; Watchalee Chuenchor; Steven E Rokita
Journal:  J Biol Chem       Date:  2014-11-13       Impact factor: 5.157

2.  BluB cannibalizes flavin to form the lower ligand of vitamin B12.

Authors:  Michiko E Taga; Nicholas A Larsen; Annaleise R Howard-Jones; Christopher T Walsh; Graham C Walker
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3.  Iodotyrosine deiodinase is the first mammalian member of the NADH oxidase/flavin reductase superfamily.

Authors:  Jessica E Friedman; James A Watson; David W-H Lam; Steven E Rokita
Journal:  J Biol Chem       Date:  2005-11-29       Impact factor: 5.157

4.  A mammalian reductive deiodinase has broad power to dehalogenate chlorinated and brominated substrates.

Authors:  Patrick M McTamney; Steven E Rokita
Journal:  J Am Chem Soc       Date:  2009-10-14       Impact factor: 15.419

5.  Mutations in the iodotyrosine deiodinase gene and hypothyroidism.

Authors:  José C Moreno; Willem Klootwijk; Hans van Toor; Graziella Pinto; Mariella D'Alessandro; Aubène Lèger; David Goudie; Michel Polak; Annette Grüters; Theo J Visser
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6.  1.8 A crystal structure of the major NAD(P)H:FMN oxidoreductase of a bioluminescent bacterium, Vibrio fischeri: overall structure, cofactor and substrate-analog binding, and comparison with related flavoproteins.

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Review 8.  The diverse roles of flavin coenzymes--nature's most versatile thespians.

Authors:  Steven O Mansoorabadi; Christopher J Thibodeaux; Hung-wen Liu
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Authors:  François Delange
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10.  Phaser crystallographic software.

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  4 in total

Review 1.  The distribution and mechanism of iodotyrosine deiodinase defied expectations.

Authors:  Zuodong Sun; Qi Su; Steven E Rokita
Journal:  Arch Biochem Biophys       Date:  2017-07-31       Impact factor: 4.013

2.  Redox control of iodotyrosine deiodinase.

Authors:  Jimin Hu; Qi Su; Jamie L Schlessman; Steven E Rokita
Journal:  Protein Sci       Date:  2018-10-17       Impact factor: 6.725

3.  Sequence Conservation Does Not Always Signify a Functional Imperative as Observed in the Nitroreductase Superfamily.

Authors:  Jonathan M Musila; Steven E Rokita
Journal:  Biochemistry       Date:  2022-03-23       Impact factor: 3.321

4.  The importance of a halotyrosine dehalogenase for Drosophila fertility.

Authors:  Abhishek Phatarphekar; Qi Su; Suk Ho Eun; Xin Chen; Steven E Rokita
Journal:  J Biol Chem       Date:  2018-05-15       Impact factor: 5.157

  4 in total

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