Literature DB >> 28151043

Insights into the function of the phasiRNA-triggering miR1514 in response to stress in legumes.

Guadalupe Sosa-Valencia1, Paulette S Romero-Pérez1, V Miguel Palomar1, Alejandra A Covarrubias1, José L Reyes1.   

Abstract

We recently described the activity of miR1514a in response to water deficit in Phaseolus vulgaris. Pvu-miR1514a targets a NAC transcription factor mRNA for cleavage and subsequently triggers NAC-derived phasiRNA formation. Here we show that accumulation and activity of miR1514a are also conserved in the model legume Medicago truncatula. Consistently, we identified Mtr-miR1514a and detected its increased accumulation in response to stress conditions, targeting a NAC TF mRNA for cleavage and triggering phasiRNA production. In P. vulgaris, miR1514a inhibition in transgenic hairy roots was reported to increase NAC 700 mRNA levels and to affect expression patterns of several genes, including that of a Sec 14 homolog. We report here that in adult plant roots exposed to dehydration conditions, where miR1514a levels increased and NAC 700 mRNA decreased, there was a reduction of Sec 14 homolog mRNA levels, suggesting a direct transcriptional effect. The functions of miR1514a, NAC 700 and derived phasiRNAs have just begun to be elucidated in common bean; future understanding of their activities in this and other legumes species will advance our knowledge of microRNA functions in plants.

Entities:  

Keywords:  Dehydration; Glycine max; Medicago truncatula; Phaseolus vulgaris; Sec 14-like; microRNAs; phased siRNAs

Mesh:

Substances:

Year:  2017        PMID: 28151043      PMCID: PMC5399905          DOI: 10.1080/15592324.2017.1284724

Source DB:  PubMed          Journal:  Plant Signal Behav        ISSN: 1559-2316


  16 in total

1.  Validation of reference genes for RT-qPCR normalization in common bean during biotic and abiotic stresses.

Authors:  Aline Borges; Siu Mui Tsai; Danielle Gregorio Gomes Caldas
Journal:  Plant Cell Rep       Date:  2011-12-23       Impact factor: 4.570

Review 2.  Phased, secondary, small interfering RNAs in posttranscriptional regulatory networks.

Authors:  Qili Fei; Rui Xia; Blake C Meyers
Journal:  Plant Cell       Date:  2013-07-23       Impact factor: 11.277

Review 3.  The expanding world of small RNAs in plants.

Authors:  Filipe Borges; Robert A Martienssen
Journal:  Nat Rev Mol Cell Biol       Date:  2015-11-04       Impact factor: 94.444

4.  Physiological analysis of common bean (Phaseolus vulgaris L.) cultivars uncovers characteristics related to terminal drought resistance.

Authors:  Miguel A Rosales; Edilia Ocampo; Rocío Rodríguez-Valentín; Yadira Olvera-Carrillo; Jorge Acosta-Gallegos; Alejandra A Covarrubias
Journal:  Plant Physiol Biochem       Date:  2012-04-21       Impact factor: 4.270

5.  Plant MPSS databases: signature-based transcriptional resources for analyses of mRNA and small RNA.

Authors:  Mayumi Nakano; Kan Nobuta; Kalyan Vemaraju; Shivakundan Singh Tej; Jeremy W Skogen; Blake C Meyers
Journal:  Nucleic Acids Res       Date:  2006-01-01       Impact factor: 16.971

6.  The Saccharomyces cerevisiae SEC14 gene encodes a cytosolic factor that is required for transport of secretory proteins from the yeast Golgi complex.

Authors:  V A Bankaitis; D E Malehorn; S D Emr; R Greene
Journal:  J Cell Biol       Date:  1989-04       Impact factor: 10.539

7.  The legume miR1514a modulates a NAC transcription factor transcript to trigger phasiRNA formation in response to drought.

Authors:  Guadalupe Sosa-Valencia; Miguel Palomar; Alejandra A Covarrubias; José L Reyes
Journal:  J Exp Bot       Date:  2017-04-01       Impact factor: 6.992

8.  Protocol: a highly sensitive RT-PCR method for detection and quantification of microRNAs.

Authors:  Erika Varkonyi-Gasic; Rongmei Wu; Marion Wood; Eric F Walton; Roger P Hellens
Journal:  Plant Methods       Date:  2007-10-12       Impact factor: 4.993

9.  Novel and nodulation-regulated microRNAs in soybean roots.

Authors:  Senthil Subramanian; Yan Fu; Ramanjulu Sunkar; W Brad Barbazuk; Jian-Kang Zhu; Oliver Yu
Journal:  BMC Genomics       Date:  2008-04-10       Impact factor: 3.969

Review 10.  MicroRNAs As Potential Targets for Abiotic Stress Tolerance in Plants.

Authors:  Varsha Shriram; Vinay Kumar; Rachayya M Devarumath; Tushar S Khare; Shabir H Wani
Journal:  Front Plant Sci       Date:  2016-06-14       Impact factor: 5.753

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  3 in total

Review 1.  Role of phasiRNAs in plant-pathogen interactions: molecular perspectives and bioinformatics tools.

Authors:  S Jyothsna; Manickavelu Alagu
Journal:  Physiol Mol Biol Plants       Date:  2022-05-27

Review 2.  Epigenetics: possible applications in climate-smart crop breeding.

Authors:  Serena Varotto; Eleni Tani; Eleni Abraham; Tamar Krugman; Aliki Kapazoglou; Rainer Melzer; Aleksandra Radanović; Dragana Miladinović
Journal:  J Exp Bot       Date:  2020-08-17       Impact factor: 6.992

Review 3.  Moving Beyond DNA Sequence to Improve Plant Stress Responses.

Authors:  Faisal Saeed; Usman Khalid Chaudhry; Allah Bakhsh; Ali Raza; Yasir Saeed; Abhishek Bohra; Rajeev K Varshney
Journal:  Front Genet       Date:  2022-04-19       Impact factor: 4.772

  3 in total

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