Literature DB >> 28141923

Voltage Gating of a Biomimetic Nanopore: Electrowetting of a Hydrophobic Barrier.

Jemma L Trick1, Chen Song1, E Jayne Wallace2, Mark S P Sansom1.   

Abstract

It is desirable that nanopores that are components of biosensors are gated, i.e., capable of controllable switching between closed (impermeable) and open (permeable) states. A central hydrophobic barrier within a nanopore may act as a voltage-dependent gate via electrowetting, i.e., changes in nanopore surface wettability by application of an electric field. We use "computational electrophysiology" simulations to demonstrate and characterize electrowetting of a biomimetic nanopore containing a hydrophobic gate. We show that a hydrophobic gate in a model β-barrel nanopore can be functionally opened by electrowetting at voltages that do not electroporate lipid bilayers. During the process of electrowetting, voltage-induced alignment of water dipoles occurs within the hydrophobic gate region of the nanopore, with water entry preceding permeation of ions through the opened nanopore. When the ionic imbalance that generates a transbilayer potential is dissipated, water is expelled from the hydrophobic gate and the nanopore recloses. The open nanopore formed by electrowetting of a "featureless" β-barrel is anionic selective due to the transmembrane dipole potential resulting from binding of Na+ ions to the headgroup regions of the surrounding lipid bilayer. Thus, hydrophobic barriers can provide voltage-dependent gates in designed biomimetic nanopores. This extends our understanding of hydrophobic gating in synthetic and biological nanopores, providing a framework for the design of functional nanopores with tailored gating functionality.

Entities:  

Keywords:  electrowetting; hydrophobic barrier; membrane; molecular dynamics simulation; nanopore

Mesh:

Substances:

Year:  2017        PMID: 28141923     DOI: 10.1021/acsnano.6b07865

Source DB:  PubMed          Journal:  ACS Nano        ISSN: 1936-0851            Impact factor:   15.881


  11 in total

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2.  Water Nanoconfined in a Hydrophobic Pore: Molecular Dynamics Simulations of Transmembrane Protein 175 and the Influence of Water Models.

Authors:  Charlotte I Lynch; Gianni Klesse; Shanlin Rao; Stephen J Tucker; Mark S P Sansom
Journal:  ACS Nano       Date:  2021-11-16       Impact factor: 15.881

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Review 4.  Water in Nanopores and Biological Channels: A Molecular Simulation Perspective.

Authors:  Charlotte I Lynch; Shanlin Rao; Mark S P Sansom
Journal:  Chem Rev       Date:  2020-08-25       Impact factor: 60.622

Review 5.  Characterizing the Structure and Interactions of Model Lipid Membranes Using Electrophysiology.

Authors:  Joyce El-Beyrouthy; Eric Freeman
Journal:  Membranes (Basel)       Date:  2021-04-27

Review 6.  Recent advances in integrated solid-state nanopore sensors.

Authors:  Mahmudur Rahman; Mohammad Julker Neyen Sampad; Aaron Hawkins; Holger Schmidt
Journal:  Lab Chip       Date:  2021-06-17       Impact factor: 7.517

7.  A heuristic derived from analysis of the ion channel structural proteome permits the rapid identification of hydrophobic gates.

Authors:  Shanlin Rao; Gianni Klesse; Phillip J Stansfeld; Stephen J Tucker; Mark S P Sansom
Journal:  Proc Natl Acad Sci U S A       Date:  2019-06-24       Impact factor: 11.205

8.  Molecular Simulations of Hydrophobic Gating of Pentameric Ligand Gated Ion Channels: Insights into Water and Ions.

Authors:  Shanlin Rao; Gianni Klesse; Charlotte I Lynch; Stephen J Tucker; Mark S P Sansom
Journal:  J Phys Chem B       Date:  2021-01-13       Impact factor: 2.991

9.  Water and hydrophobic gates in ion channels and nanopores.

Authors:  Shanlin Rao; Charlotte I Lynch; Gianni Klesse; Georgia E Oakley; Phillip J Stansfeld; Stephen J Tucker; Mark S P Sansom
Journal:  Faraday Discuss       Date:  2018-09-28       Impact factor: 4.008

10.  Computational Study of the Ion and Water Permeation and Transport Mechanisms of the SARS-CoV-2 Pentameric E Protein Channel.

Authors:  Yipeng Cao; Rui Yang; Wei Wang; Imshik Lee; Ruiping Zhang; Wenwen Zhang; Jiana Sun; Bo Xu; Xiangfei Meng
Journal:  Front Mol Biosci       Date:  2020-09-23
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