Literature DB >> 28141505

Sphingobacterium cellulitidis sp. nov., isolated from clinical and environmental sources.

Geert Huys1, Prashant Purohit2, Chuan Hao Tan3, Cindy Snauwaert1, Paul De Vos1, Huda Al Saffar4, Ina'am Al Obaid2, Hans-Jürgen Busse5, Torsten Seemann6, M John Albert7.   

Abstract

The taxonomic position of two isolates belonging to the genus Sphingobacterium was determined. The first isolate, R-53603T, was obtained from purulent discharge from the toe of a cellulitis patient in Kuwait. Comparative 16S rRNA gene sequence analysis revealed 99.87 % similarity of R-53603T with environmental isolate P031 (=R-53745) originating from activated sludge in Singapore. The two isolates were phylogenetically positioned on the same sub-branch. Highest 16S rRNA gene sequence similarity was found with the type strains of Sphingobacterium mizutaii (98.23 %), Sphingobacterium lactis (97.78 %) and Sphingobacterium daejeonense (97.14 %). DNA-DNA hybridizations revealed <70 % relatedness between the two isolates and the type strains of the close phylogenetic neighbours S. mizutaii(18.0-24.5 %), S. lactis(20.3-25.9 %) and S. daejeonense(13.2-20.0 %). The high relative contribution of iso-C15 : 0, iso-C17 : 0 3-OH and summed feature 3 (iso-C15 : 0 2-OH and/or C16 : 1ω7c) in the cellular fatty acid profiles of R-53603T and R-53745, the presence of sphingophospholipids, MK-7 as the dominant menaquinone and phosphatidylethanolamine as the major polar lipid in strain R-53603T are typical chemotaxonomic characteristics for members of the genus Sphingobacterium. Phenotypic features most useful for differentiation of the two novel strains from the most closely related species S. mizutaii include growth on MacConkey agar, and utilization of stachyose, guanidine HCl and lithium chloride in Biolog GEN III tests. Strains R-53603T and R-53745 thus represent a novel species, for which the name Sphingobacterium cellulitidis sp. nov. is proposed. The type strain is R-53603T (=LMG 28764T=DSM 102028T).

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Year:  2017        PMID: 28141505     DOI: 10.1099/ijsem.0.001832

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  4 in total

Review 1.  An Update on the Novel Genera and Species and Revised Taxonomic Status of Bacterial Organisms Described in 2016 and 2017.

Authors:  Erik Munson; Karen C Carroll
Journal:  J Clin Microbiol       Date:  2019-01-30       Impact factor: 5.948

2.  Draft Genome Sequences of Two Strains of a Newly Described Species, Sphingobacterium cellulitidis.

Authors:  Torsten Seemann; Dieter M Bulach; Glen Carter; M John Albert
Journal:  Genome Announc       Date:  2017-09-21

3.  Convergent alteration of lung tissue microbiota and tumor cells in lung cancer.

Authors:  Hui Dong; Qiang Tan; Yuanyuan Xu; Yongqiang Zhu; Yaxian Yao; Yuezhu Wang; Chong Li; Hong Li; Guoqing Zhang; Yan Xiong; Meihua Ruan; Jiadong Zhao; Weirong Jin; Lungen Lu; Shun Lu
Journal:  iScience       Date:  2021-12-16

4.  Epidemiological and phylogenetic analysis reveals Flavobacteriaceae as potential ancestral source of tigecycline resistance gene tet(X).

Authors:  Rong Zhang; Ning Dong; Zhangqi Shen; Yu Zeng; Jiauyue Lu; Congcong Liu; Hongwei Zhou; Yanyan Hu; Qiaoling Sun; Qipeng Cheng; Lingbing Shu; Jiachang Cai; Edward Wai-Chi Chan; Gongxiang Chen; Sheng Chen
Journal:  Nat Commun       Date:  2020-09-16       Impact factor: 14.919

  4 in total

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