Literature DB >> 28139974

The LIM protein complex establishes a retinal circuitry of visual adaptation by regulating Pax6 α-enhancer activity.

Yeha Kim1, Soyeon Lim1, Taejeong Ha1, You-Hyang Song1, Young-In Sohn1, Dae-Jin Park2, Sun-Sook Paik3, Joo-Ri Kim-Kaneyama4, Mi-Ryoung Song5, Amanda Leung6, Edward M Levine6, In-Beom Kim3, Yong Sook Goo2, Seung-Hee Lee1, Kyung Hwa Kang7, Jin Woo Kim1.   

Abstract

The visual responses of vertebrates are sensitive to the overall composition of retinal interneurons including amacrine cells, which tune the activity of the retinal circuitry. The expression of Paired-homeobox 6 (PAX6) is regulated by multiple cis-DNA elements including the intronic α-enhancer, which is active in GABAergic amacrine cell subsets. Here, we report that the transforming growth factor ß1-induced transcript 1 protein (Tgfb1i1) interacts with the LIM domain transcription factors Lhx3 and Isl1 to inhibit the α-enhancer in the post-natal mouse retina. Tgfb1i1-/- mice show elevated α-enhancer activity leading to overproduction of Pax6ΔPD isoform that supports the GABAergic amacrine cell fate maintenance. Consequently, the Tgfb1i1-/- mouse retinas show a sustained light response, which becomes more transient in mice with the auto-stimulation-defective Pax6ΔPBS/ΔPBS mutation. Together, we show the antagonistic regulation of the α-enhancer activity by Pax6 and the LIM protein complex is necessary for the establishment of an inner retinal circuitry, which controls visual adaptation.

Entities:  

Keywords:  LIM domain protein; Pax6; cell fate determination; chromosomes; genes; mouse; neuroscience; retina; visual adaptation

Mesh:

Substances:

Year:  2017        PMID: 28139974      PMCID: PMC5308899          DOI: 10.7554/eLife.21303

Source DB:  PubMed          Journal:  Elife        ISSN: 2050-084X            Impact factor:   8.140


  61 in total

1.  Role of the LIM domains in DNA recognition by the Lhx3 neuroendocrine transcription factor.

Authors:  J A Bridwell; J R Price; G E Parker; A McCutchan Schiller; K W Sloop; S J Rhodes
Journal:  Gene       Date:  2001-10-17       Impact factor: 3.688

2.  LIM factor Lhx3 contributes to the specification of motor neuron and interneuron identity through cell-type-specific protein-protein interactions.

Authors:  Joshua P Thaler; Soo-Kyung Lee; Linda W Jurata; Gordon N Gill; Samuel L Pfaff
Journal:  Cell       Date:  2002-07-26       Impact factor: 41.582

3.  Activation of the glycoprotein hormone alpha-subunit promoter by a LIM-homeodomain transcription factor.

Authors:  M S Roberson; W E Schoderbek; G Tremml; R A Maurer
Journal:  Mol Cell Biol       Date:  1994-05       Impact factor: 4.272

Review 4.  The role of homeobox genes in retinal development and disease.

Authors:  Jamie L Zagozewski; Qi Zhang; Vanessa I Pinto; Jeffrey T Wigle; David D Eisenstat
Journal:  Dev Biol       Date:  2014-07-15       Impact factor: 3.582

Review 5.  Functional architecture of the retina: development and disease.

Authors:  Mrinalini Hoon; Haruhisa Okawa; Luca Della Santina; Rachel O L Wong
Journal:  Prog Retin Eye Res       Date:  2014-06-28       Impact factor: 21.198

6.  Expression of LIM-homeodomain transcription factors in the developing and mature mouse retina.

Authors:  Revathi Balasubramanian; Andrew Bui; Qian Ding; Lin Gan
Journal:  Gene Expr Patterns       Date:  2013-12-10       Impact factor: 1.224

7.  Rapid quantification of adult and developing mouse spatial vision using a virtual optomotor system.

Authors:  Glen T Prusky; Nazia M Alam; Steven Beekman; Robert M Douglas
Journal:  Invest Ophthalmol Vis Sci       Date:  2004-12       Impact factor: 4.799

8.  Developmental expression of a novel murine homeobox gene (Chx10): evidence for roles in determination of the neuroretina and inner nuclear layer.

Authors:  I S Liu; J D Chen; L Ploder; D Vidgen; D van der Kooy; V I Kalnins; R R McInnes
Journal:  Neuron       Date:  1994-08       Impact factor: 17.173

9.  PAX6 gene dosage effect in a family with congenital cataracts, aniridia, anophthalmia and central nervous system defects.

Authors:  T Glaser; L Jepeal; J G Edwards; S R Young; J Favor; R L Maas
Journal:  Nat Genet       Date:  1994-08       Impact factor: 38.330

10.  Vax genes ventralize the embryonic eye.

Authors:  Stina H Mui; Jin Woo Kim; Greg Lemke; Stefano Bertuzzi
Journal:  Genes Dev       Date:  2005-05-15       Impact factor: 11.361

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  11 in total

1.  Lhx9 Is Required for the Development of Retinal Nitric Oxide-Synthesizing Amacrine Cell Subtype.

Authors:  Revathi Balasubramanian; Andrew Bui; Xuhui Dong; Lin Gan
Journal:  Mol Neurobiol       Date:  2017-04-29       Impact factor: 5.590

Review 2.  Signaling and Gene Regulatory Networks in Mammalian Lens Development.

Authors:  Ales Cvekl; Xin Zhang
Journal:  Trends Genet       Date:  2017-08-31       Impact factor: 11.639

3.  Differential Expression of NF2 in Neuroepithelial Compartments Is Necessary for Mammalian Eye Development.

Authors:  Kyeong Hwan Moon; Hyoung-Tai Kim; Dahye Lee; Mahesh B Rao; Edward M Levine; Dae-Sik Lim; Jin Woo Kim
Journal:  Dev Cell       Date:  2017-12-14       Impact factor: 12.270

4.  mTORC1 accelerates retinal development via the immunoproteasome.

Authors:  Ji-Heon Choi; Hong Seok Jo; Soyeon Lim; Hyoung-Tai Kim; Kang Woo Lee; Kyeong Hwan Moon; Taejeong Ha; Sang Soo Kwak; Yeha Kim; Eun Jung Lee; Cheol O Joe; Jin Woo Kim
Journal:  Nat Commun       Date:  2018-06-27       Impact factor: 14.919

5.  Tsg101 Is Necessary for the Establishment and Maintenance of Mouse Retinal Pigment Epithelial Cell Polarity.

Authors:  Dai Le; Soyeon Lim; Kwang Wook Min; Joon Woo Park; Youjoung Kim; Taejeong Ha; Kyeong Hwan Moon; Kay-Uwe Wagner; Jin Woo Kim
Journal:  Mol Cells       Date:  2021-03-31       Impact factor: 5.034

6.  Mapping transgene insertion sites reveals the α-Cre transgene expression in both developing retina and olfactory neurons.

Authors:  Yimeng Fan; Wenyue Chen; Ran Wei; Wei Qiang; Joel D Pearson; Tao Yu; Rod Bremner; Danian Chen
Journal:  Commun Biol       Date:  2022-05-03

7.  Arc Regulates Transcription of Genes for Plasticity, Excitability and Alzheimer's Disease.

Authors:  How-Wing Leung; Gabriel Foo; Antonius VanDongen
Journal:  Biomedicines       Date:  2022-08-11

8.  Lampreys, the jawless vertebrates, contain three Pax6 genes with distinct expression in eye, brain and pancreas.

Authors:  Vydianathan Ravi; Shipra Bhatia; Prashant Shingate; Boon-Hui Tay; Byrappa Venkatesh; Dirk A Kleinjan
Journal:  Sci Rep       Date:  2019-12-20       Impact factor: 4.379

9.  Global Analysis of Intercellular Homeodomain Protein Transfer.

Authors:  Eun Jung Lee; Namsuk Kim; Jun Woo Park; Kyung Hwa Kang; Woo-Il Kim; Nam Suk Sim; Chan-Seok Jeong; Seth Blackshaw; Marc Vidal; Sung-Oh Huh; Dongsup Kim; Jeong Ho Lee; Jin Woo Kim
Journal:  Cell Rep       Date:  2019-07-16       Impact factor: 9.995

10.  LIM-Homeodomain Transcription Factor LHX4 Is Required for the Differentiation of Retinal Rod Bipolar Cells and OFF-Cone Bipolar Subtypes.

Authors:  Xuhui Dong; Hua Yang; Xiangtian Zhou; Xiaoling Xie; Dongliang Yu; Luming Guo; Mei Xu; Wenjun Zhang; Guoqing Liang; Lin Gan
Journal:  Cell Rep       Date:  2020-09-15       Impact factor: 9.995

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