Literature DB >> 2813364

On the ion selectivity in Ca-binding proteins: the cyclo(-L-Pro-Gly-)3 peptide as a model.

F Sussman1, H Weinstein.   

Abstract

Calcium plays a crucial role in many cellular processes. Its functions are directly dependent on the high specificity for Ca2+ exhibited by the proteins and ion carriers that bind divalent ions. To elucidate the basis for this specificity we have calculated the relative energies of solvation of calcium and magnesium ions in complexes with cyclo(-L-Pro-Gly-)3, a small synthetic peptide that binds Ca2+ with an affinity comparable to those of the naturally occurring proteins. The results show that the ion selectivity of the peptide resides in the difference in the solvation energies of the competing ions in water. Although the peptide is able to complex Mg2+ better than Ca2+ in the stoichiometries in which cyclo(-L-Pro-Gly-)3 binds divalent ions, it is not always able to provide as much stabilization for Mg2+ as water does. These results also explain why cyclo(-L-Pro-Gly-)3 binds Ca2+ and Mg2+ with different stoichiometries and indicate the source for expected differences in the structures of complexes of the two ions.

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Year:  1989        PMID: 2813364      PMCID: PMC298175          DOI: 10.1073/pnas.86.20.7880

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  16 in total

1.  Structure-function relationships in EF-hand Ca2+-binding proteins. Protein engineering and biophysical studies of calbindin D9k.

Authors:  S Linse; P Brodin; T Drakenberg; E Thulin; P Sellers; K Elmdén; T Grundström; S Forsén
Journal:  Biochemistry       Date:  1987-10-20       Impact factor: 3.162

2.  Theoretical calculation of relative binding affinity in host-guest systems.

Authors:  T P Lybrand; J A McCammon; G Wipff
Journal:  Proc Natl Acad Sci U S A       Date:  1986-02       Impact factor: 11.205

3.  Toward computer-aided site-directed mutagenesis of enzymes.

Authors:  A Warshel; F Sussman
Journal:  Proc Natl Acad Sci U S A       Date:  1986-06       Impact factor: 11.205

Review 4.  Structure and evolution of calcium-modulated proteins.

Authors:  R H Kretsinger
Journal:  CRC Crit Rev Biochem       Date:  1980

5.  Conformation of cyclo(-L-Pro-Gly-)(3) and its Ca and Mg complexes.

Authors:  G Kartha; K I Varughese; S Aimoto
Journal:  Proc Natl Acad Sci U S A       Date:  1982-07       Impact factor: 11.205

6.  Is the binding of magnesium (II) to calmodulin significant? An investigation by magnesium-25 nuclear magnetic resonance.

Authors:  M D Tsai; T Drakenberg; E Thulin; S Forsén
Journal:  Biochemistry       Date:  1987-06-16       Impact factor: 3.162

7.  Calculation of the relative change in binding free energy of a protein-inhibitor complex.

Authors:  P A Bash; U C Singh; F K Brown; R Langridge; P A Kollman
Journal:  Science       Date:  1987-01-30       Impact factor: 47.728

8.  Refined crystal structure of troponin C from turkey skeletal muscle at 2.0 A resolution.

Authors:  O Herzberg; M N James
Journal:  J Mol Biol       Date:  1988-10-05       Impact factor: 5.469

9.  Calcium-induced protein folding. Structure-affinity relationships in synthetic analogs of the helix-loop-helix calcium binding unit.

Authors:  R E Reid; J Gariépy; A K Saund; R S Hodges
Journal:  J Biol Chem       Date:  1981-03-25       Impact factor: 5.157

10.  The refined structure of vitamin D-dependent calcium-binding protein from bovine intestine. Molecular details, ion binding, and implications for the structure of other calcium-binding proteins.

Authors:  D M Szebenyi; K Moffat
Journal:  J Biol Chem       Date:  1986-07-05       Impact factor: 5.157

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  3 in total

1.  How ions affect the structure of water.

Authors:  Barbara Hribar; Noel T Southall; Vojko Vlachy; Ken A Dill
Journal:  J Am Chem Soc       Date:  2002-10-16       Impact factor: 15.419

2.  Structural analysis of Mg2+ and Ca2+ binding to CaBP1, a neuron-specific regulator of calcium channels.

Authors:  Jennifer N Wingard; Jenny Chan; Ivan Bosanac; Françoise Haeseleer; Krzysztof Palczewski; Mitsuhiko Ikura; James B Ames
Journal:  J Biol Chem       Date:  2005-09-07       Impact factor: 5.157

3.  Molecular tuning of an EF-hand-like calcium binding loop. Contributions of the coordinating side chain at loop position 3.

Authors:  S K Drake; M A Zimmer; C Kundrot; J J Falke
Journal:  J Gen Physiol       Date:  1997-08       Impact factor: 4.086

  3 in total

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