Literature DB >> 28127592

Low-Density Locality-Sensitive Hashing Boosts Metagenomic Binning.

Yunan Luo1, Jianyang Zeng2, Bonnie Berger3, Jian Peng4.   

Abstract

Entities:  

Year:  2016        PMID： 28127592      PMCID： PMC5260810     

Source DB:  PubMed          Journal:  Res Comput Mol Biol


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  5 in total

1.  Basic local alignment search tool.

Authors:  S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
Journal:  J Mol Biol       Date:  1990-10-05       Impact factor: 5.469

2.  Accurate phylogenetic classification of variable-length DNA fragments.

Authors:  Alice Carolyn McHardy; Héctor García Martín; Aristotelis Tsirigos; Philip Hugenholtz; Isidore Rigoutsos
Journal:  Nat Methods       Date:  2006-12-10       Impact factor: 28.547

3.  Fast gapped-read alignment with Bowtie 2.

Authors:  Ben Langmead; Steven L Salzberg
Journal:  Nat Methods       Date:  2012-03-04       Impact factor: 28.547

4.  Entropy-scaling search of massive biological data.

Authors:  Y William Yu; Noah M Daniels; David Christian Danko; Bonnie Berger
Journal:  Cell Syst       Date:  2015-08-26       Impact factor: 10.304

5.  Taxonomic metagenome sequence assignment with structured output models.

Authors:  Kaustubh R Patil; Peter Haider; Phillip B Pope; Peter J Turnbaugh; Mark Morrison; Tobias Scheffer; Alice C McHardy
Journal:  Nat Methods       Date:  2011-03       Impact factor: 28.547
  5 in total
  1 in total

1.  Learning structural motif representations for efficient protein structure search.

Authors:  Yang Liu; Qing Ye; Liwei Wang; Jian Peng
Journal:  Bioinformatics       Date:  2018-09-01       Impact factor: 6.937
  1 in total

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