Literature DB >> 28125289

Structural Studies of Amyloid Proteins at the Molecular Level.

David S Eisenberg1, Michael R Sawaya1.   

Abstract

Dozens of proteins are known to convert to the aggregated amyloid state. These include fibrils associated with systemic and neurodegenerative diseases and cancer, functional amyloid fibrils in microorganisms and animals, and many denatured proteins. Amyloid fibrils can be much more stable than other protein assemblies. In contrast to globular proteins, a single protein sequence can aggregate into several distinctly different amyloid structures, termed polymorphs, and a given polymorph can reproduce itself by seeding. Amyloid polymorphs may be the molecular basis of prion strains. Whereas the Protein Data Bank contains some 100,000 globular protein and 3,000 membrane protein structures, only a few dozen amyloid protein structures have been determined, and most of these are short segments of full amyloid-forming proteins. Regardless, these amyloid structures illuminate the architecture of the amyloid state, including its stability and its capacity for formation of polymorphs.

Entities:  

Keywords:  X-ray diffraction; amyloid symmetry; cryo-EM; cryo–electron microscopy; polymorphs; solid-state nuclear magnetic resonance; ssNMR; steric zipper

Mesh:

Substances:

Year:  2017        PMID: 28125289     DOI: 10.1146/annurev-biochem-061516-045104

Source DB:  PubMed          Journal:  Annu Rev Biochem        ISSN: 0066-4154            Impact factor:   23.643


  133 in total

Review 1.  Impact of membrane curvature on amyloid aggregation.

Authors:  Mayu S Terakawa; Yuxi Lin; Misaki Kinoshita; Shingo Kanemura; Dai Itoh; Toshihiko Sugiki; Masaki Okumura; Ayyalusamy Ramamoorthy; Young-Ho Lee
Journal:  Biochim Biophys Acta Biomembr       Date:  2018-04-28       Impact factor: 3.747

2.  Surveying the Energy Landscapes of Aβ Fibril Polymorphism.

Authors:  Mingchen Chen; Nicholas P Schafer; Peter G Wolynes
Journal:  J Phys Chem B       Date:  2018-10-01       Impact factor: 2.991

3.  Crystal structures of amyloidogenic segments of human transthyretin.

Authors:  Lorena Saelices; Stuart A Sievers; Michael R Sawaya; David S Eisenberg
Journal:  Protein Sci       Date:  2018-06-13       Impact factor: 6.725

4.  A Second Backbone: The Contribution of a Buried Asparagine Ladder to the Global and Local Stability of a Leucine-Rich Repeat Protein.

Authors:  Sean A Klein; Ananya Majumdar; Doug Barrick
Journal:  Biochemistry       Date:  2019-08-06       Impact factor: 3.162

5.  Heat shock protein 104 (HSP104) chaperones soluble Tau via a mechanism distinct from its disaggregase activity.

Authors:  Xiang Zhang; Shengnan Zhang; Li Zhang; Jinxia Lu; Chunyu Zhao; Feng Luo; Dan Li; Xueming Li; Cong Liu
Journal:  J Biol Chem       Date:  2019-02-04       Impact factor: 5.157

Review 6.  Understanding amyloid fibril formation using protein fragments: structural investigations via vibrational spectroscopy and solid-state NMR.

Authors:  Benjamin Martial; Thierry Lefèvre; Michèle Auger
Journal:  Biophys Rev       Date:  2018-05-31

7.  Identification of two principal amyloid-driving segments in variable domains of Ig light chains in systemic light-chain amyloidosis.

Authors:  Boris Brumshtein; Shannon R Esswein; Michael R Sawaya; Gregory Rosenberg; Alan T Ly; Meytal Landau; David S Eisenberg
Journal:  J Biol Chem       Date:  2018-10-24       Impact factor: 5.157

8.  The Unfolded State of the C-Terminal Domain of L9 Expands at Low but Not at Elevated Temperatures.

Authors:  Natalie E Stenzoski; Bowu Luan; Alex S Holehouse; Daniel P Raleigh
Journal:  Biophys J       Date:  2018-07-23       Impact factor: 4.033

9.  Use of Two Dimensional Semi-denaturing Detergent Agarose Gel Electrophoresis to Confirm Size Heterogeneity of Amyloid or Amyloid-like Fibers.

Authors:  Sarah Hanna-Addams; Zhigao Wang
Journal:  J Vis Exp       Date:  2018-04-26       Impact factor: 1.355

10.  Protein mimetic amyloid inhibitor potently abrogates cancer-associated mutant p53 aggregation and restores tumor suppressor function.

Authors:  L Palanikumar; Laura Karpauskaite; Mohamed Al-Sayegh; Ibrahim Chehade; Maheen Alam; Sarah Hassan; Debabrata Maity; Liaqat Ali; Mona Kalmouni; Yamanappa Hunashal; Jemil Ahmed; Tatiana Houhou; Shake Karapetyan; Zackary Falls; Ram Samudrala; Renu Pasricha; Gennaro Esposito; Ahmed J Afzal; Andrew D Hamilton; Sunil Kumar; Mazin Magzoub
Journal:  Nat Commun       Date:  2021-06-25       Impact factor: 14.919

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